Ss1.1-rcsp24b_g20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACATCCTCGGGCTCCCCAAGTGACGAGGACATTAGGGGTGCAGAATGGGCATTTAGGTCA AAGCGGTCCTCTGCACGACAGCACAGACAGCAGGGGACAGAGGCTCCCTGCTCCGTCACG GTCACCACAGCTGTGTGTGCAGCGCCCCCCCCCACTGGGGGGGGGGGAAACCAGAAAGTC TATGGTTTTAATCCTCGGTGGCACCTCACACAAAAAGGATTTTTTTTTTTTTCAAAGAAA GATGAGGTTGGCTTGGTTCTTCATGCCCATGTTAGGTAGGGCTCTTTTTCTCTTTTCCTT GCTCGTTTCGTCGGGGGACGTCTGTGCTGTGCTGGGGTGGTGAAGGCATCTGCACTCAAA ACGGTTTACAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACATCCTCGGGCTCCCCAAGTGACGAGGACATTAGGGGTGCAGAATGGGCATTTAGGTCA AAGCGGTCCTCTGCACGACAGCACAGACAGCAGGGGACAGAGGCTCCCTGCTCCGTCACG GTCACCACAGCTGTGTGTGCAGCGCCCCCCCCCACTGGGGGGGGGGGAAACCAGAAAGTC TATGGTTTTAATCCTCGGTGGCACCTCACACAAAAAGGATTTTTTTTTTTTTCAAAGAAA GATGAGGTTGGCTTGGTTCTTCATGCCCATGTTAGGTAGGGCTCTTTTTCTCTTTTCCTT GCTCGTTTCGTCGGGGGACGTCTGTGCTGTGCTGGGGTGGTGAAGGCATCTGCACTCAAA ACGGTTTACAGA |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 170-372, gnl|bosTau2|chr18 (12110921-12111125) | |
| 170-372, gnl|canFam2|chr5 (70909774-70909968) | |
| 170-372, gnl|canFam2|chr5 (70909778-70909963) | |
| 170-372, gnl|canFam2|chr5 (70909993-70909584) | |
| 170-372, gnl|canFam2|chr5 (70909938-70909574) | |
| 170-372, gnl|dasNov1|scaffold_18248 (19345-18948) | |
| 170-372, gnl|dasNov1|scaffold_90201 (265-72) | |
| 170-372, gnl|dasNov1|scaffold_90201 (265-77) | |
| 170-372, gnl|dasNov1|scaffold_90201 (97-456) | |
| 170-372, gnl|echTel1|scaffold_276228 (10737-10935) | |
| 170-372, gnl|echTel1|scaffold_276228 (10738-10935) | |
| 170-372, gnl|echTel1|scaffold_276228 (10976-10566) | |
| 170-372, gnl|echTel1|scaffold_276228 (10925-10557) | |
| 170-372, gnl|hg17|chr15 (76903543-76903930) | |
| 170-372, gnl|hg17|chr16 (83156669-83157087) | |
| 170-372, gnl|Hg17|chr16 (83156947-83156732) | |
| 170-372, gnl|hg17|chr17 (20410408-20410606) | |
| 170-372, gnl|hg17|chr17 (16699976-16700170) | |
| 170-372, gnl|mm7|chr8 (118444400-118444723) | |
| 170-372, gnl|mm7|chr8 (118444433-118444753) | |
| 170-372, gnl|monDom2|scaffold_23 (15888102-15888270) | |
| 170-372, gnl|monDom2|scaffold_23 (15888102-15888269) | |
| 170-372, gnl|monDom2|scaffold_23 (15888293-15887937) | |
| 170-372, gnl|oryCun1|scaffold_124699 (4057-4224) | |
| 170-372, gnl|oryCun1|scaffold_124699 (4057-4224) | |
| 170-372, gnl|oryCun1|scaffold_124699 (4256-3886) | |
| 170-372, gnl|oryCun1|scaffold_124699 (4210-3876) | |
| 170-372, gnl|panTro1|chr16 (77610365-77610752) | |
| 170-372, gnl|panTro1|chr18 (78052096-78052514) | |
| 170-372, gnl|panTro1|chr19 (17065167-17065365) | |
| 170-372, gnl|panTro1|chr19 (17065167-17065362) | |
| 170-372, gnl|rheMac2|chr16 (18337016-18336829) | |
| 170-372, gnl|rheMac2|chr16 (18337016-18336832) | |
| 170-372, gnl|rheMac2|chr20 (82694466-82694879) | |
| 170-372, gnl|rheMac2|chr7 (57948062-57948448) | |
| 170-372, gnl|rn3|chr19 (50101685-50101507) | |
| 170-372, gnl|rn3|chr19 (50101685-50101503) | |
| 170-372, gnl|rn3|chr19 (50101509-50101809) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 170-372, gnl|bosTau2|chr18 (12110921-12111125) | |
| 170-372, gnl|canFam2|chr5 (70909774-70909968) | |
| 170-372, gnl|canFam2|chr5 (70909778-70909963) | |
| 170-372, gnl|canFam2|chr5 (70909993-70909584) | |
| 170-372, gnl|canFam2|chr5 (70909938-70909574) | |
| 170-372, gnl|dasNov1|scaffold_18248 (19345-18948) | |
| 170-372, gnl|dasNov1|scaffold_90201 (265-72) | |
| 170-372, gnl|dasNov1|scaffold_90201 (265-77) | |
| 170-372, gnl|dasNov1|scaffold_90201 (97-456) | |
| 170-372, gnl|echTel1|scaffold_276228 (10737-10935) | |
| 170-372, gnl|echTel1|scaffold_276228 (10738-10935) | |
| 170-372, gnl|echTel1|scaffold_276228 (10976-10566) | |
| 170-372, gnl|echTel1|scaffold_276228 (10925-10557) | |
| 170-372, gnl|hg17|chr15 (76903543-76903930) | |
| 170-372, gnl|hg17|chr16 (83156669-83157087) | |
| 170-372, gnl|Hg17|chr16 (83156947-83156732) | |
| 170-372, gnl|hg17|chr17 (20410408-20410606) | |
| 170-372, gnl|hg17|chr17 (16699976-16700170) | |
| 170-372, gnl|mm7|chr8 (118444400-118444723) | |
| 170-372, gnl|mm7|chr8 (118444433-118444753) | |
| 170-372, gnl|monDom2|scaffold_23 (15888102-15888270) | |
| 170-372, gnl|monDom2|scaffold_23 (15888102-15888269) | |
| 170-372, gnl|monDom2|scaffold_23 (15888293-15887937) | |
| 170-372, gnl|oryCun1|scaffold_124699 (4057-4224) | |
| 170-372, gnl|oryCun1|scaffold_124699 (4057-4224) | |
| 170-372, gnl|oryCun1|scaffold_124699 (4256-3886) | |
| 170-372, gnl|oryCun1|scaffold_124699 (4210-3876) | |
| 170-372, gnl|panTro1|chr16 (77610365-77610752) | |
| 170-372, gnl|panTro1|chr18 (78052096-78052514) | |
| 170-372, gnl|panTro1|chr19 (17065167-17065365) | |
| 170-372, gnl|panTro1|chr19 (17065167-17065362) | |
| 170-372, gnl|rheMac2|chr16 (18337016-18336829) | |
| 170-372, gnl|rheMac2|chr16 (18337016-18336832) | |
| 170-372, gnl|rheMac2|chr20 (82694466-82694879) | |
| 170-372, gnl|rheMac2|chr7 (57948062-57948448) | |
| 170-372, gnl|rn3|chr19 (50101685-50101507) | |
| 170-372, gnl|rn3|chr19 (50101685-50101503) | |
| 170-372, gnl|rn3|chr19 (50101509-50101809) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| csp (0.644745) | |
| ill (0.175593) |