Non-Coding RNA Search

Ss1.1-rcsp28b_p17.5

Sequence:


               
               CTCTCCTTCCCCACCTTCACCCCCCTCCCTCTTTTCACTGTTGCTTTCTATGTATAGCTC
CCTAGACCTTTCACTTTTTTAAAAACGCGTTTTGTGTAGAGAATAAGGAACGTGGATCTT
TTTATTTTGCAATCCTGGGCCAGCTAGAAACCCAGAGCTGATTGACCTTTTAACTTTTTT
CAGTGGCCACATTTTGGTTATTGATGTACCTAGAAGTATGTAAATTAGATTAAATTTCTC
TTCTGGAAACACCCCGGGGCAGGCGGCCAGCGTGTGTTTTTCTGTCAAGTGGACAGGCTG
GCATTGTCTGTCTGGCAGCCAGGGCTGGGATCGAGCCGCCTCCGCCAAAAGCCCCTGGAA
GCCCTGACTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTCCTTCCCCACCTTCACCCCCCTCCCTCTTTTCACTGTTGCTTTCTATGTATAGCTC
CCTAGACCTTTCACTTTTTTAAAAACGCGTTTTGTGTAGAGAATAAGGAACGTGGATCTT
TTTATTTTGCAATCCTGGGCCAGCTAGAAACCCAGAGCTGATTGACCTTTTAACTTTTTT
CAGTGGCCACATTTTGGTTATTGATGTACCTAGAAGTATGTAAATTAGATTAAATTTCTC
TTCTGGAAACACCCCGGGGCAGGCGGCCAGCGTGTGTTTTTCTGTCAAGTGGACAGGCTG
GCATTGTCTGTCTGGCAGCCAGGGCTGGGATCGAGCCGCCTCCGCCAAAAGCCCCTGGAA
GCCCTGACTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               31-372, gnl|bosTau2|chr7 (6907106-6907447)
               

               
               31-372, gnl|Hg17|chr19 (15394125-15393786)
               

               
               31-372, gnl|Mm7|chr17 (30549142-30548805)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-372, gnl|bosTau2|chr7 (6907106-6907447)
               

               
               31-372, gnl|Hg17|chr19 (15394125-15393786)
               

               
               31-372, gnl|Mm7|chr17 (30549142-30548805)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csp (0.161186)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.161186)

	31-372, gnl\|bosTau2\|chr7 (6907106-6907447)
	31-372, gnl\|Hg17\|chr19 (15394125-15393786)
	31-372, gnl\|Mm7\|chr17 (30549142-30548805)