Ss1.1-rcsp37b_c10.5
|
AGGAAGGGGAGGCCTACGAGGAGCCGGACAGTGAGGAAGGCTCCGAGTTCTATGAGAACG
ACTCCAACCTCGGGCGGGATCAGCTCTCCCAGGATGGCAGCAACTACGAAAACCCTGAGG
AGGGGGTCTTGGGTCCTGAGGATGAAGACTCCTTCTCCAACGCTGAGTCTTATGAGAATG
AGGATGAAGAGTTGGTCCAGCCGGTTGCCAGGACGACAGACTTCCTGAGCCCCCATGGGT
CAGCCTGGGACCCCAGCAGGGAGGCAACCTCCCTCGGGTCCCAGTCCTATGAAGATATGA
GAGGGATCCTGTATGCAGCCCCCCAGCTCCGCTCCTTTCGAGGCCAGCCTGGTCCCAACC
ACGAGGAAGATGCGGACTCTTATGAGAATATGGATAATCCTGATGGGCCAGAACCAGCAT
GGGGAGGAGGGGGCCACATGGGCGCCTGGAGCACTAGGTGATGTATTTCAGGTGCAGTTC
TGTCGATGGAAACCACATGTCAAACCGGCCAAGTAACAAGTCTGAAAGTACACAACGAGC
ACTTCACAGAGCTGGAAGTGGATCCAGAAATCTGGCTGCAGGTCTAGCCACTGTGCCTAC
CACCTAATAAACAGTCCTAAGCTACAAAGCATGAACACAGACTTCAGAGCTAGAAGTCGC
CAGGCCCTGAAACCATCACTGTGTAGCAAGTGCCACCACACCCAAATTCCTGTCTCAGGC
AAAGGTGGGATCGGTCACTCATAGTCCTGGCATCTCCTCCCTGTCTCTCCAGCGCCAGAG
CTCTTCTGAAACCTAGGACTGACATCTAAAACCCAGTCCCTCTCCTGCCCCAGAAGTTTC
GATGCTCTCTGTAAGACTACCTAGAGTTTTTCAGTATCTACATTTTTTTTCTAGAATTCC |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGAAGGGGAGGCCTACGAGGAGCCGGACAGTGAGGAAGGCTCCGAGTTCTATGAGAACG
ACTCCAACCTCGGGCGGGATCAGCTCTCCCAGGATGGCAGCAACTACGAAAACCCTGAGG
AGGGGGTCTTGGGTCCTGAGGATGAAGACTCCTTCTCCAACGCTGAGTCTTATGAGAATG
AGGATGAAGAGTTGGTCCAGCCGGTTGCCAGGACGACAGACTTCCTGAGCCCCCATGGGT
CAGCCTGGGACCCCAGCAGGGAGGCAACCTCCCTCGGGTCCCAGTCCTATGAAGATATGA
GAGGGATCCTGTATGCAGCCCCCCAGCTCCGCTCCTTTCGAGGCCAGCCTGGTCCCAACC
ACGAGGAAGATGCGGACTCTTATGAGAATATGGATAATCCTGATGGGCCAGAACCAGCAT
GGGGAGGAGGGGGCCACATGGGCGCCTGGAGCACTAGGTGATGTATTTCAGGTGCAGTTC
TGTCGATGGAAACCACATGTCAAACCGGCCAAGTAACAAGTCTGAAAGTACACAACGAGC
ACTTCACAGAGCTGGAAGTGGATCCAGAAATCTGGCTGCAGGTCTAGCCACTGTGCCTAC
CACCTAATAAACAGTCCTAAGCTACAAAGCATGAACACAGACTTCAGAGCTAGAAGTCGC
CAGGCCCTGAAACCATCACTGTGTAGCAAGTGCCACCACACCCAAATTCCTGTCTCAGGC
AAAGGTGGGATCGGTCACTCATAGTCCTGGCATCTCCTCCCTGTCTCTCCAGCGCCAGAG
CTCTTCTGAAACCTAGGACTGACATCTAAAACCCAGTCCCTCTCCTGCCCCAGAAGTTTC
GATGCTCTCTGTAAGACTACCTAGAGTTTTTCAGTATCTACATTTTTTTTCTAGAATTCC |
|
gi|61808827|ref|XP_598609.1| |
Protein identifier
|
gi|61808827|ref|XP_598609.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
368-474, gnl|bosTau2|chr25 (24854599-24854496) |
|
368-474, gnl|canFam2|chr6 (21437118-21437811) |
|
368-474, gnl|dasNov1|scaffold_278123 (1484-781) |
|
368-474, gnl|echTel1|scaffold_323613 (1969-1316) |
|
368-474, gnl|hg17|chr16 (28857407-28858104) |
|
368-474, gnl|Hg17|chr16 (28857692-28857803) |
|
368-474, gnl|mm7|chr7 (122506335-122505621) |
|
368-474, gnl|Mm7|chr7 (122506023-122505912) |
|
368-474, gnl|monDom2|scaffold_5 (119318950-119318187) |
|
368-474, gnl|oryCun1|scaffold_142041 (3716-4416) |
|
368-474, gnl|panTro1|chr18 (29580624-29581328) |
|
368-474, gnl|rheMac2|chr20 (26904084-26903398) |
|
368-474, gnl|rn3|chr1 (185652440-185651702) |
| |
|
530-900, gnl|bosTau2|chr25 (24853033-24852699) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
368-474, gnl|bosTau2|chr25 (24854599-24854496) |
|
368-474, gnl|canFam2|chr6 (21437118-21437811) |
|
368-474, gnl|dasNov1|scaffold_278123 (1484-781) |
|
368-474, gnl|echTel1|scaffold_323613 (1969-1316) |
|
368-474, gnl|hg17|chr16 (28857407-28858104) |
|
368-474, gnl|Hg17|chr16 (28857692-28857803) |
|
368-474, gnl|mm7|chr7 (122506335-122505621) |
|
368-474, gnl|Mm7|chr7 (122506023-122505912) |
|
368-474, gnl|monDom2|scaffold_5 (119318950-119318187) |
|
368-474, gnl|oryCun1|scaffold_142041 (3716-4416) |
|
368-474, gnl|panTro1|chr18 (29580624-29581328) |
|
368-474, gnl|rheMac2|chr20 (26904084-26903398) |
|
368-474, gnl|rn3|chr1 (185652440-185651702) |
| |
|
530-900, gnl|bosTau2|chr25 (24853033-24852699) |
|
gul (0.355177) |
|
csp (0.322373) |
|
lnt (0.284616) |
|
cly (0.241284) |
|
ill (0.175593) |
|
spl (0.143184) |
|
gul (0.355177) |
|
csp (0.322373) |
|
lnt (0.284616) |
|
cly (0.241284) |
|
ill (0.175593) |
|
spl (0.143184) |
