Ss1.1-rcst02_b19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTATGTCCTCTTGGCCATCTATCTTGATCAAGTCATTCCAGGAGAATTTGGCTTACGGA GATCATCTTTATATTTTCTGAAGCCATCATATTGGTCAAAGAGCAAAAGAAATTATAAGG AGTTATCAGAGGGGAATGTTAATGGGAATATTAGTTTTAGTGAAATTGTTGAGCCTGTTT CTTCAGAATTTATAGGAAAAGAGGCTATAAGAATCAGTAGTATTCAGAAGACATACAGAA AGAAAGGTGAAAATGTGGAGGCTTTGAGAAATTTGTCATTTGACATATATGAGGGTCAGA TTACTGCACTCCTTGGCCACAGTGGGACAGGAAAGAGTACATTGATGAATATTCTTTGTG GACTTTGCCCGCCTTCTGATGGGTTTGCATCCATATATGGACACAGAGTCTCTGAAATAG ATGAAATGTTTGAAGCAAGAAAGATGATTGGCATTTGTCCGCAGTTAGATATACACTTTG ATGTTCTGACAGTAGAAGAAAACTTATCCATTTTGGCTTCAATCAAAGGAATACCAGCCA ATAATGTAATACAAGAAGTACAGAGGGTTTTACTGGACTTAGACATGCAAGCTATCAAAG ATAATCAGGCTAAAAAGTTAAGTGGTGGTCAAAAAAGAAAACTGTCTTTAGGAATTGCTG TTCTTGGGAATCCAAAGATATTGTTGCTGGATGAACCTACAGCCGGAATGGACCCCTGTT CTCGTCATATTGTTTGGAATCTTCTGAAATACAGAAAATCTAATCGGGTGACAGTGTTTA CTACTCATTTCATGGATGAAGCTGACATTCTTGCTGATAGGAAAGCTGTCATATCACAAG GAATGTTAAAGTGTGTTGGTTCTTCAATTTTTCTCAAAAGTAAATGGGGGATTGGCTACC GCCTCAGCATGTACATAGACAGGTACTGTGCCACGGAATCACTTTCTTCTCTGGTTAAAC AACATATACCTGCAGCTACTTTATTACAGCAGAATGACCAACAGCTTGTGTACAGTTTGC CTTTCAAGGACATGGACAAATTTTCAGGTTTATTTTCTGCTCTAGACGCTCATTCAAATT TGGGTGTCATTTCTTATGGTGTTTCCATGACGACTTTGGAAGACGTATTCTTGAAGCTAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTATGTCCTCTTGGCCATCTATCTTGATCAAGTCATTCCAGGAGAATTTGGCTTACGGA GATCATCTTTATATTTTCTGAAGCCATCATATTGGTCAAAGAGCAAAAGAAATTATAAGG AGTTATCAGAGGGGAATGTTAATGGGAATATTAGTTTTAGTGAAATTGTTGAGCCTGTTT CTTCAGAATTTATAGGAAAAGAGGCTATAAGAATCAGTAGTATTCAGAAGACATACAGAA AGAAAGGTGAAAATGTGGAGGCTTTGAGAAATTTGTCATTTGACATATATGAGGGTCAGA TTACTGCACTCCTTGGCCACAGTGGGACAGGAAAGAGTACATTGATGAATATTCTTTGTG GACTTTGCCCGCCTTCTGATGGGTTTGCATCCATATATGGACACAGAGTCTCTGAAATAG ATGAAATGTTTGAAGCAAGAAAGATGATTGGCATTTGTCCGCAGTTAGATATACACTTTG ATGTTCTGACAGTAGAAGAAAACTTATCCATTTTGGCTTCAATCAAAGGAATACCAGCCA ATAATGTAATACAAGAAGTACAGAGGGTTTTACTGGACTTAGACATGCAAGCTATCAAAG ATAATCAGGCTAAAAAGTTAAGTGGTGGTCAAAAAAGAAAACTGTCTTTAGGAATTGCTG TTCTTGGGAATCCAAAGATATTGTTGCTGGATGAACCTACAGCCGGAATGGACCCCTGTT CTCGTCATATTGTTTGGAATCTTCTGAAATACAGAAAATCTAATCGGGTGACAGTGTTTA CTACTCATTTCATGGATGAAGCTGACATTCTTGCTGATAGGAAAGCTGTCATATCACAAG GAATGTTAAAGTGTGTTGGTTCTTCAATTTTTCTCAAAAGTAAATGGGGGATTGGCTACC GCCTCAGCATGTACATAGACAGGTACTGTGCCACGGAATCACTTTCTTCTCTGGTTAAAC AACATATACCTGCAGCTACTTTATTACAGCAGAATGACCAACAGCTTGTGTACAGTTTGC CTTTCAAGGACATGGACAAATTTTCAGGTTTATTTTCTGCTCTAGACGCTCATTCAAATT TGGGTGTCATTTCTTATGGTGTTTCCATGACGACTTTGGAAGACGTATTCTTGAAGCTAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 60 entry(ies) | More info |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
| 37-211, gnl|bosTau2|chr19 (55863444-55863618) | |
| 37-211, gnl|canFam2|chr9 (18883610-18883817) | |
| 37-211, gnl|danRer3|chrNA (137401033-137400805) | |
| 37-211, gnl|dasNov1|scaffold_7392 (49990-50195) | |
| 37-211, gnl|echTel1|scaffold_226388 (6809-6582) | |
| 37-211, gnl|fr1|chrUn (140578767-140578970) | |
| 37-211, gnl|galGal2|chr18 (7762074-7762267) | |
| 37-211, gnl|hg17|chr17 (64804925-64805138) | |
| 37-211, gnl|Hg17|chr17 (64805101-64804927) | |
| 37-211, gnl|loxAfr1|scaffold_7596 (39650-39442) | |
| 37-211, gnl|mm7|chr11 (110419176-110419386) | |
| 37-211, gnl|Mm7|chr11 (110419348-110419178) | |
| 37-211, gnl|monDom2|scaffold_18 (22834103-22834309) | |
| 37-211, gnl|oryCun1|scaffold_146196 (7798-8012) | |
| 37-211, gnl|panTro1|chr19 (68111561-68111774) | |
| 37-211, gnl|rheMac2|chr16 (64546789-64547002) | |
| 37-211, gnl|rn3|chr10 (99780545-99780755) | |
| 37-211, gnl|tetNig1|chr2 (2119566-2119769) | |
| 37-211, gnl|xenTro1|scaffold_299 (51440-51643) | |
| 381-560, gnl|bosTau2|chr19 (55870698-55870877) | |
| 381-560, gnl|Hg17|chr17 (64797774-64797595) | |
| 381-560, gnl|Mm7|chr11 (110414067-110413888) | |
| 682-816, gnl|bosTau2|chr19 (55872770-55872904) | |
| 682-816, gnl|canFam2|chr9 (18872163-18872277) | |
| 682-816, gnl|danRer3|chrNA (137406906-137406770) | |
| 682-816, gnl|dasNov1|scaffold_16737 (41759-41638) | |
| 682-816, gnl|echTel1|scaffold_289823 (47971-48092) | |
| 682-816, gnl|fr1|chrUn (140577687-140577807) | |
| 682-816, gnl|galGal2|chr18 (7758967-7759086) | |
| 682-816, gnl|hg17|chr17 (64795330-64795451) | |
| 682-816, gnl|Hg17|chr17 (64795483-64795349) | |
| 682-816, gnl|loxAfr1|scaffold_7596 (47977-47856) | |
| 682-816, gnl|mm7|chr11 (110412015-110412136) | |
| 682-816, gnl|Mm7|chr11 (110412168-110412034) | |
| 682-816, gnl|monDom2|scaffold_18 (22809840-22809956) | |
| 682-816, gnl|oryCun1|scaffold_204418 (38280-38401) | |
| 682-816, gnl|panTro1|chr19 (68101698-68101819) | |
| 682-816, gnl|rheMac2|chr16 (64537158-64537279) | |
| 682-816, gnl|rn3|chr10 (99774138-99774259) | |
| 682-816, gnl|tetNig1|chr2 (2118416-2118519) | |
| 682-816, gnl|xenTro1|scaffold_299 (42910-43013) | |
| 905-1049, gnl|bosTau2|chr19 (55873951-55874095) | |
| 905-1049, gnl|canFam2|chr9 (18871080-18871198) | |
| 905-1049, gnl|danRer3|chrNA (137409116-137408998) | |
| 905-1049, gnl|dasNov1|scaffold_16737 (43426-43308) | |
| 905-1049, gnl|echTel1|scaffold_280422 (2395-2281) | |
| 905-1049, gnl|fr1|chrUn (140577295-140577413) | |
| 905-1049, gnl|galGal2|chr18 (7758306-7758424) | |
| 905-1049, gnl|hg17|chr17 (64793632-64793750) | |
| 905-1049, gnl|Hg17|chr17 (64793776-64793632) | |
| 905-1049, gnl|loxAfr1|scaffold_7596 (49653-49535) | |
| 905-1049, gnl|mm7|chr11 (110410452-110410570) | |
| 905-1049, gnl|Mm7|chr11 (110410596-110410452) | |
| 905-1049, gnl|monDom2|scaffold_18 (22808910-22809028) | |
| 905-1049, gnl|oryCun1|scaffold_213042 (84719-84601) | |
| 905-1049, gnl|panTro1|chr19 (68100003-68100121) | |
| 905-1049, gnl|rheMac2|chr16 (64535473-64535591) | |
| 905-1049, gnl|rn3|chr10 (99772628-99772746) | |
| 905-1049, gnl|tetNig1|chr2 (2118000-2118102) | |
| 905-1049, gnl|xenTro1|scaffold_299 (41359-41477) |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 37-211, gnl|bosTau2|chr19 (55863444-55863618) | |
| 37-211, gnl|canFam2|chr9 (18883610-18883817) | |
| 37-211, gnl|danRer3|chrNA (137401033-137400805) | |
| 37-211, gnl|dasNov1|scaffold_7392 (49990-50195) | |
| 37-211, gnl|echTel1|scaffold_226388 (6809-6582) | |
| 37-211, gnl|fr1|chrUn (140578767-140578970) | |
| 37-211, gnl|galGal2|chr18 (7762074-7762267) | |
| 37-211, gnl|hg17|chr17 (64804925-64805138) | |
| 37-211, gnl|Hg17|chr17 (64805101-64804927) | |
| 37-211, gnl|loxAfr1|scaffold_7596 (39650-39442) | |
| 37-211, gnl|mm7|chr11 (110419176-110419386) | |
| 37-211, gnl|Mm7|chr11 (110419348-110419178) | |
| 37-211, gnl|monDom2|scaffold_18 (22834103-22834309) | |
| 37-211, gnl|oryCun1|scaffold_146196 (7798-8012) | |
| 37-211, gnl|panTro1|chr19 (68111561-68111774) | |
| 37-211, gnl|rheMac2|chr16 (64546789-64547002) | |
| 37-211, gnl|rn3|chr10 (99780545-99780755) | |
| 37-211, gnl|tetNig1|chr2 (2119566-2119769) | |
| 37-211, gnl|xenTro1|scaffold_299 (51440-51643) | |
| 381-560, gnl|bosTau2|chr19 (55870698-55870877) | |
| 381-560, gnl|Hg17|chr17 (64797774-64797595) | |
| 381-560, gnl|Mm7|chr11 (110414067-110413888) | |
| 682-816, gnl|bosTau2|chr19 (55872770-55872904) | |
| 682-816, gnl|canFam2|chr9 (18872163-18872277) | |
| 682-816, gnl|danRer3|chrNA (137406906-137406770) | |
| 682-816, gnl|dasNov1|scaffold_16737 (41759-41638) | |
| 682-816, gnl|echTel1|scaffold_289823 (47971-48092) | |
| 682-816, gnl|fr1|chrUn (140577687-140577807) | |
| 682-816, gnl|galGal2|chr18 (7758967-7759086) | |
| 682-816, gnl|hg17|chr17 (64795330-64795451) | |
| 682-816, gnl|Hg17|chr17 (64795483-64795349) | |
| 682-816, gnl|loxAfr1|scaffold_7596 (47977-47856) | |
| 682-816, gnl|mm7|chr11 (110412015-110412136) | |
| 682-816, gnl|Mm7|chr11 (110412168-110412034) | |
| 682-816, gnl|monDom2|scaffold_18 (22809840-22809956) | |
| 682-816, gnl|oryCun1|scaffold_204418 (38280-38401) | |
| 682-816, gnl|panTro1|chr19 (68101698-68101819) | |
| 682-816, gnl|rheMac2|chr16 (64537158-64537279) | |
| 682-816, gnl|rn3|chr10 (99774138-99774259) | |
| 682-816, gnl|tetNig1|chr2 (2118416-2118519) | |
| 682-816, gnl|xenTro1|scaffold_299 (42910-43013) | |
| 905-1049, gnl|bosTau2|chr19 (55873951-55874095) | |
| 905-1049, gnl|canFam2|chr9 (18871080-18871198) | |
| 905-1049, gnl|danRer3|chrNA (137409116-137408998) | |
| 905-1049, gnl|dasNov1|scaffold_16737 (43426-43308) | |
| 905-1049, gnl|echTel1|scaffold_280422 (2395-2281) | |
| 905-1049, gnl|fr1|chrUn (140577295-140577413) | |
| 905-1049, gnl|galGal2|chr18 (7758306-7758424) | |
| 905-1049, gnl|hg17|chr17 (64793632-64793750) | |
| 905-1049, gnl|Hg17|chr17 (64793776-64793632) | |
| 905-1049, gnl|loxAfr1|scaffold_7596 (49653-49535) | |
| 905-1049, gnl|mm7|chr11 (110410452-110410570) | |
| 905-1049, gnl|Mm7|chr11 (110410596-110410452) | |
| 905-1049, gnl|monDom2|scaffold_18 (22808910-22809028) | |
| 905-1049, gnl|oryCun1|scaffold_213042 (84719-84601) | |
| 905-1049, gnl|panTro1|chr19 (68100003-68100121) | |
| 905-1049, gnl|rheMac2|chr16 (64535473-64535591) | |
| 905-1049, gnl|rn3|chr10 (99772628-99772746) | |
| 905-1049, gnl|tetNig1|chr2 (2118000-2118102) | |
| 905-1049, gnl|xenTro1|scaffold_299 (41359-41477) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cst (0.140036) |