Ss1.1-rcst02_e21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGTCTCCCATTAACTTGAACTCAAGAGAAGCTAGATACGACCCTTCCCTGCTGGATGTC CGCCTCTCCCCAAATTATGTAGTCTGCCGAGACTGTGAGGTCACCAACGATGGACATACC ATTCAGGTTATTCTGAAGTCAAAATCAGTTCTTTCAGGAGGTCCACTGCCTCAGGGACAT GAATTTGAACTGTACGAAGTTAGATTTCATTGGGGAAGAGAAAACCAGCGTGGTTCTGAG CACACAGTAAATTTCAAAGCTTTCCCCATGGAGCTCCACCTGATCCACTGGAACTCCACC TTGTTTGGCAGTATTGATGAGGCTGTGGGGAAGCCCCATGGAATCGCCATCATTGCTTTG TTCGTTCAGATAGGAAAAGAACACGTAGGCCTGAAGGCTGTGACTGAAATCCTCCAAGAT ATTCAATATAAGGGGAAGTCCAAAACAATACCCTGCTTTAATCCTAACACTTTATTACCA GGTAAGCGTTCATCTGGCTGCGTAAGATGAATTTGAACTGTGAAGATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGTCTCCCATTAACTTGAACTCAAGAGAAGCTAGATACGACCCTTCCCTGCTGGATGTC CGCCTCTCCCCAAATTATGTAGTCTGCCGAGACTGTGAGGTCACCAACGATGGACATACC ATTCAGGTTATTCTGAAGTCAAAATCAGTTCTTTCAGGAGGTCCACTGCCTCAGGGACAT GAATTTGAACTGTACGAAGTTAGATTTCATTGGGGAAGAGAAAACCAGCGTGGTTCTGAG CACACAGTAAATTTCAAAGCTTTCCCCATGGAGCTCCACCTGATCCACTGGAACTCCACC TTGTTTGGCAGTATTGATGAGGCTGTGGGGAAGCCCCATGGAATCGCCATCATTGCTTTG TTCGTTCAGATAGGAAAAGAACACGTAGGCCTGAAGGCTGTGACTGAAATCCTCCAAGAT ATTCAATATAAGGGGAAGTCCAAAACAATACCCTGCTTTAATCCTAACACTTTATTACCA GGTAAGCGTTCATCTGGCTGCGTAAGATGAATTTGAACTGTGAAGATG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 1-157, gnl|bosTau2|chr14 (12269122-12268966) | |
| 1-157, gnl|canFam2|chr29 (13765179-13765284) | |
| 1-157, gnl|danRer3|chr2 (10707327-10707432) | |
| 1-157, gnl|echTel1|scaffold_24810 (1746-1851) | |
| 1-157, gnl|fr1|chrUn (146048375-146048270) | |
| 1-157, gnl|galGal2|chr2 (112195227-112195124) | |
| 1-157, gnl|hg17|chr8 (61354794-61354899) | |
| 1-157, gnl|Hg17|chr8 (61354949-61354793) | |
| 1-157, gnl|mm7|chr4 (8165058-8165163) | |
| 1-157, gnl|Mm7|chr4 (8165213-8165057) | |
| 1-157, gnl|monDom2|scaffold_4 (102699658-102699553) | |
| 1-157, gnl|panTro1|chr7 (63122927-63123032) | |
| 1-157, gnl|rheMac2|chr8 (62863456-62863561) | |
| 1-157, gnl|rn3|chr5 (22048326-22048431) | |
| 1-157, gnl|tetNig1|chrUn_random (89792519-89792617) | |
| 1-157, gnl|xenTro1|scaffold_8 (3860953-3861051) | |
| 262-372, gnl|bosTau2|chr14 (12224034-12223924) | |
| 262-372, gnl|canFam2|chr29 (13722898-13723007) | |
| 262-372, gnl|danRer3|chr2 (10704236-10704337) | |
| 262-372, gnl|dasNov1|scaffold_36559 (199-90) | |
| 262-372, gnl|fr1|chrUn (146049899-146049795) | |
| 262-372, gnl|galGal2|chr2 (112218084-112217978) | |
| 262-372, gnl|hg17|chr8 (61307387-61307496) | |
| 262-372, gnl|Hg17|chr8 (61307504-61307394) | |
| 262-372, gnl|loxAfr1|scaffold_13317 (47553-47662) | |
| 262-372, gnl|mm7|chr4 (8116434-8116543) | |
| 262-372, gnl|Mm7|chr4 (8116551-8116441) | |
| 262-372, gnl|monDom2|scaffold_4 (102764265-102764156) | |
| 262-372, gnl|panTro1|chr7 (63074571-63074681) | |
| 262-372, gnl|rheMac2|chr8 (62814122-62814231) | |
| 262-372, gnl|rn3|chr5 (22001288-22001397) | |
| 262-372, gnl|tetNig1|chrUn_random (89791497-89791601) | |
| 262-372, gnl|xenTro1|scaffold_8 (3850896-3850998) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-157, gnl|bosTau2|chr14 (12269122-12268966) | |
| 1-157, gnl|canFam2|chr29 (13765179-13765284) | |
| 1-157, gnl|danRer3|chr2 (10707327-10707432) | |
| 1-157, gnl|echTel1|scaffold_24810 (1746-1851) | |
| 1-157, gnl|fr1|chrUn (146048375-146048270) | |
| 1-157, gnl|galGal2|chr2 (112195227-112195124) | |
| 1-157, gnl|hg17|chr8 (61354794-61354899) | |
| 1-157, gnl|Hg17|chr8 (61354949-61354793) | |
| 1-157, gnl|mm7|chr4 (8165058-8165163) | |
| 1-157, gnl|Mm7|chr4 (8165213-8165057) | |
| 1-157, gnl|monDom2|scaffold_4 (102699658-102699553) | |
| 1-157, gnl|panTro1|chr7 (63122927-63123032) | |
| 1-157, gnl|rheMac2|chr8 (62863456-62863561) | |
| 1-157, gnl|rn3|chr5 (22048326-22048431) | |
| 1-157, gnl|tetNig1|chrUn_random (89792519-89792617) | |
| 1-157, gnl|xenTro1|scaffold_8 (3860953-3861051) | |
| 262-372, gnl|bosTau2|chr14 (12224034-12223924) | |
| 262-372, gnl|canFam2|chr29 (13722898-13723007) | |
| 262-372, gnl|danRer3|chr2 (10704236-10704337) | |
| 262-372, gnl|dasNov1|scaffold_36559 (199-90) | |
| 262-372, gnl|fr1|chrUn (146049899-146049795) | |
| 262-372, gnl|galGal2|chr2 (112218084-112217978) | |
| 262-372, gnl|hg17|chr8 (61307387-61307496) | |
| 262-372, gnl|Hg17|chr8 (61307504-61307394) | |
| 262-372, gnl|loxAfr1|scaffold_13317 (47553-47662) | |
| 262-372, gnl|mm7|chr4 (8116434-8116543) | |
| 262-372, gnl|Mm7|chr4 (8116551-8116441) | |
| 262-372, gnl|monDom2|scaffold_4 (102764265-102764156) | |
| 262-372, gnl|panTro1|chr7 (63074571-63074681) | |
| 262-372, gnl|rheMac2|chr8 (62814122-62814231) | |
| 262-372, gnl|rn3|chr5 (22001288-22001397) | |
| 262-372, gnl|tetNig1|chrUn_random (89791497-89791601) | |
| 262-372, gnl|xenTro1|scaffold_8 (3850896-3850998) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbe (0.478469) | |
| cst (0.280073) | |
| kid (0.129735) |