Non-Coding RNA Search

Ss1.1-rcst03_b22.5

Sequence:


               
               TTGAATCCACATCCTCATGGATATTAGTTGGGCTTGTTAATGCTGATCCACAATAGGAAC
TCAAGGCTGATTGTTTTCTTGTTGGCCAAAGTTGTTGTTGTTAGACCAAAGAGAAGCATT
CTAGAAATTTCTTGAGAAAGAGAGAAGACAGACTGTTTTCTCTTCTTCTGTTCGCTTGTG
TGCCACCTCTAGATTCCTGGACTTGAAGCTCATAGCCCACAGTGTACAGCAGGACTGGCC
AGAAGCTTAGGGAGTCAGCCTCTGAATGTGAAATTGGTAAGGTGTGCAGTCTGTAGACTC
AGATGAGCTGGCTCTGCATCCCAGCTCAGCATCTTTGTCACTGTGGGATCTTGTGCAAGC
TTGGGCTCTCTGAGCTTTTCCTTCCTTAGCTGTAAAAGAGGGGAAACTGTACCCATCTTT
TAAAGATGCTATGAAAATAAAATAGAGTAATGAACATAAAAACAATAGGTCAGAACCCAG
TACTCAAAATGGTACAGTTATTCTTGATATTGTTTAGCGTATGTAATAAAATCAGTTGTA
CCGTCCTGTACATCCAACTGAATGACAGTGTGGTCATTGTTTAATGGACATGCATGTGCT
TAGAAATCCAGAGTAGAAGGCTGATGATGAGAACCCTGGGAACCTCCTTGTCCTTTGAAT
ACAGGGTTCAGCAAACCAGCCAAAGAGGAATGAGGAACGGTGCCAAAGCCATTAGAGAAT
CCAATCAGACCCCTCTACATGGCAATGTTTTTGGAGTTGTTAGGACTTAAGGATTGATCT
GATTTCTCTGAAAGGCCCTTCATGGTCACCATTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGAATCCACATCCTCATGGATATTAGTTGGGCTTGTTAATGCTGATCCACAATAGGAAC
TCAAGGCTGATTGTTTTCTTGTTGGCCAAAGTTGTTGTTGTTAGACCAAAGAGAAGCATT
CTAGAAATTTCTTGAGAAAGAGAGAAGACAGACTGTTTTCTCTTCTTCTGTTCGCTTGTG
TGCCACCTCTAGATTCCTGGACTTGAAGCTCATAGCCCACAGTGTACAGCAGGACTGGCC
AGAAGCTTAGGGAGTCAGCCTCTGAATGTGAAATTGGTAAGGTGTGCAGTCTGTAGACTC
AGATGAGCTGGCTCTGCATCCCAGCTCAGCATCTTTGTCACTGTGGGATCTTGTGCAAGC
TTGGGCTCTCTGAGCTTTTCCTTCCTTAGCTGTAAAAGAGGGGAAACTGTACCCATCTTT
TAAAGATGCTATGAAAATAAAATAGAGTAATGAACATAAAAACAATAGGTCAGAACCCAG
TACTCAAAATGGTACAGTTATTCTTGATATTGTTTAGCGTATGTAATAAAATCAGTTGTA
CCGTCCTGTACATCCAACTGAATGACAGTGTGGTCATTGTTTAATGGACATGCATGTGCT
TAGAAATCCAGAGTAGAAGGCTGATGATGAGAACCCTGGGAACCTCCTTGTCCTTTGAAT
ACAGGGTTCAGCAAACCAGCCAAAGAGGAATGAGGAACGGTGCCAAAGCCATTAGAGAAT
CCAATCAGACCCCTCTACATGGCAATGTTTTTGGAGTTGTTAGGACTTAAGGATTGATCT
GATTTCTCTGAAAGGCCCTTCATGGTCACCATTCCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               91-815, gnl|bosTau2|chr22 (24483990-24484711)
               

               
               91-815, gnl|Hg17|chr3 (71397034-71396314)
               

               
               91-815, gnl|Mm7|chr6 (99317503-99316652)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               91-815, gnl|bosTau2|chr22 (24483990-24484711)
               

               
               91-815, gnl|Hg17|chr3 (71397034-71396314)
               

               
               91-815, gnl|Mm7|chr6 (99317503-99316652)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cst (0.140036)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)

	91-815, gnl\|bosTau2\|chr22 (24483990-24484711)
	91-815, gnl\|Hg17\|chr3 (71397034-71396314)
	91-815, gnl\|Mm7\|chr6 (99317503-99316652)