Non-Coding RNA Search

Ss1.1-rcst04_a22.5

Sequence:


               
               TCATCTGTAAATCAAGTACAAACCTGTATGTATTTGACTTAACTGTAAAATATATATGCA
CTACTTTAAAAAAATGTTGATTAATAGATTAAATTTTTAAATTAATTTTTTAAACATACT
GTATATTGTATCACAATGTTGATGTGCCAAAATATTCTGTTATCATCATGCAGAGTATAA
GAATGCTTTGAACAATTTATAAACTTAGTGAAATAAAATATGAGGAAAGCCAAAAAAAAA
GAAAATGAAAAGCTGGTATATTCTCTTTCGCTTACAGTTGTGCCTTTTTATTTTTCTAAT
TATAGCAGTCAGTTCTGGGTACCCTAATATGTGGTTAGTGTCTATTTTAATGTTGTCTCA
GATAGCTTTGGGTGTTTTAATATATGATGAAAAAGAACTTCCATGAAACATTTCAAACTT
GCATTAATGGAGAGAGTCCAAAGAGTAATTTTTTGTTTTAACAAATTTTACTAGAAGTAA
AAATGACGAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCATCTGTAAATCAAGTACAAACCTGTATGTATTTGACTTAACTGTAAAATATATATGCA
CTACTTTAAAAAAATGTTGATTAATAGATTAAATTTTTAAATTAATTTTTTAAACATACT
GTATATTGTATCACAATGTTGATGTGCCAAAATATTCTGTTATCATCATGCAGAGTATAA
GAATGCTTTGAACAATTTATAAACTTAGTGAAATAAAATATGAGGAAAGCCAAAAAAAAA
GAAAATGAAAAGCTGGTATATTCTCTTTCGCTTACAGTTGTGCCTTTTTATTTTTCTAAT
TATAGCAGTCAGTTCTGGGTACCCTAATATGTGGTTAGTGTCTATTTTAATGTTGTCTCA
GATAGCTTTGGGTGTTTTAATATATGATGAAAAAGAACTTCCATGAAACATTTCAAACTT
GCATTAATGGAGAGAGTCCAAAGAGTAATTTTTTGTTTTAACAAATTTTACTAGAAGTAA
AAATGACGAGCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-492, gnl|bosTau2|chr18 (40395872-40396367)
               

               
               1-492, gnl|Hg17|chr2 (118582312-118582811)
               

               
               1-492, gnl|Mm7|chr1 (121176537-121176073)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-492, gnl|bosTau2|chr18 (40395872-40396367)
               

               
               1-492, gnl|Hg17|chr2 (118582312-118582811)
               

               
               1-492, gnl|Mm7|chr1 (121176537-121176073)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cst (0.280073)
               

               
               mcp (0.170648)
               

               
               ova (0.129132)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.280073)
               

               
               mcp (0.170648)
               

               
               ova (0.129132)

	1-492, gnl\|bosTau2\|chr18 (40395872-40396367)
	1-492, gnl\|Hg17\|chr2 (118582312-118582811)
	1-492, gnl\|Mm7\|chr1 (121176537-121176073)