Non-Coding RNA Search

Ss1.1-rcst14_c12.5

Sequence:


               
               GAAGACACCCCTCAGAACCGCCTCGGAGACCCGACCGGCCGGGTCTGGAGAGCGGGGCTC
TGACTTCCATAACTGATGAAATCACCAAAAGATACCTACAGGACGCTGGGACAGCCTGTA
ACACACCATCCAACATCTGGAAAACACCATCAGTGACATGAATCCCAAAGCCTTACTTGA
CACCTCGGGTTCTTCCAGCAAAGGTCCTGCTGCGAGCTCGCCCCACCTGGCCCAGGAGGC
CTGTCCCCTATCCTTGCTAGTTCTGGATGAATCTCCCACTGCCCCAGAGCCCCCCTCATC
TATACCTTCAGCGTCACGTAAGGGCTCCACCGGGACCCCCCACACTATCAGGATGCCGGT
TCCCATGATTTCCAAGAACATACCCGGAAGCCTGGACAAACCTGGCAAGCAGTCCAAACT
GCAGGATCCCCGCCTATATCGTCAGGTAGTTTTACCTTAGTCCCAATTTTGGACGGACAC
TCTTGCACTTACGGAGCAAGTCGCTGACTTACTTTATACCAAATATTGCGTTTGTAAGAT
AAACGGTTTACGTTAGACATCCTGGATCTGGGGGCATGAAGAATGGCTAAAAAGCCTTTG
TCGAACTTCTCACCACGCTTTTGCATGCTCGCAGTAAAACATCTTTTACTTTGTGACGCC
AGCGTTGACCTGTTAACACAAGGCGCCAAGGTGGCTCTTCTTGGGGGAGTGTGGTGGTTC
GGTCAGAACCCCTTGGAAAACTGAGACGAACCTGCCCAGAAAGTCACCTGTACTAACATG
TGTGTTGACTGCATCGCACTAGAGGCTCATTAACTCTCTCCATCACGATGCCCCCACCAC
ACCCCAATAACAGCCCCCACGCATGGCCCCCCCCAGCACCCGGAACTGGTAGTAGAATGA
TGTGCCTGTTCTCACAAATGCTCTTCTTCCTTCTTTCCTCTTCCGTCCGTCCTCTGCCCT
GCACTTTGGGGGTTTCTCCCAGGTCCAGGTCTGCACCACGAGACTTACTTAGCTCAGGCC
TTACACTGGTTTGGTTTGGTTGTGTCTTTGATGTGATGATTCTCAGAAGGGCTGTGTTGC
CAGACCCTGTGGATTGATGGAGTTACTGGCTTTCTGACAGACTGTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGACACCCCTCAGAACCGCCTCGGAGACCCGACCGGCCGGGTCTGGAGAGCGGGGCTC
TGACTTCCATAACTGATGAAATCACCAAAAGATACCTACAGGACGCTGGGACAGCCTGTA
ACACACCATCCAACATCTGGAAAACACCATCAGTGACATGAATCCCAAAGCCTTACTTGA
CACCTCGGGTTCTTCCAGCAAAGGTCCTGCTGCGAGCTCGCCCCACCTGGCCCAGGAGGC
CTGTCCCCTATCCTTGCTAGTTCTGGATGAATCTCCCACTGCCCCAGAGCCCCCCTCATC
TATACCTTCAGCGTCACGTAAGGGCTCCACCGGGACCCCCCACACTATCAGGATGCCGGT
TCCCATGATTTCCAAGAACATACCCGGAAGCCTGGACAAACCTGGCAAGCAGTCCAAACT
GCAGGATCCCCGCCTATATCGTCAGGTAGTTTTACCTTAGTCCCAATTTTGGACGGACAC
TCTTGCACTTACGGAGCAAGTCGCTGACTTACTTTATACCAAATATTGCGTTTGTAAGAT
AAACGGTTTACGTTAGACATCCTGGATCTGGGGGCATGAAGAATGGCTAAAAAGCCTTTG
TCGAACTTCTCACCACGCTTTTGCATGCTCGCAGTAAAACATCTTTTACTTTGTGACGCC
AGCGTTGACCTGTTAACACAAGGCGCCAAGGTGGCTCTTCTTGGGGGAGTGTGGTGGTTC
GGTCAGAACCCCTTGGAAAACTGAGACGAACCTGCCCAGAAAGTCACCTGTACTAACATG
TGTGTTGACTGCATCGCACTAGAGGCTCATTAACTCTCTCCATCACGATGCCCCCACCAC
ACCCCAATAACAGCCCCCACGCATGGCCCCCCCCAGCACCCGGAACTGGTAGTAGAATGA
TGTGCCTGTTCTCACAAATGCTCTTCTTCCTTCTTTCCTCTTCCGTCCGTCCTCTGCCCT
GCACTTTGGGGGTTTCTCCCAGGTCCAGGTCTGCACCACGAGACTTACTTAGCTCAGGCC
TTACACTGGTTTGGTTTGGTTGTGTCTTTGATGTGATGATTCTCAGAAGGGCTGTGTTGC
CAGACCCTGTGGATTGATGGAGTTACTGGCTTTCTGACAGACTGTCTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-323, gnl|bosTau2|chr13 (11813441-11813120)
               

               
               1-323, gnl|Hg17|chr10 (24873096-24873417)
               

               
               1-323, gnl|Mm7|chr2 (20872212-20872533)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-323, gnl|bosTau2|chr13 (11813441-11813120)
               

               
               1-323, gnl|Hg17|chr10 (24873096-24873417)
               

               
               1-323, gnl|Mm7|chr2 (20872212-20872533)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cst (0.140036)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)

	1-323, gnl\|bosTau2\|chr13 (11813441-11813120)
	1-323, gnl\|Hg17\|chr10 (24873096-24873417)
	1-323, gnl\|Mm7\|chr2 (20872212-20872533)