Ss1.1-rcst18_k24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGACCTGAAGATTGGAAGTGACCTGGCAAGGGAGAAGAAGGACAAGCAAGAGTGAAAGAG TAGCAAACCCTGAAGTGGTTCCAAGGGTTTACCTCGTGACCACAGAGACCCATCTCTGCC AGAGAGGAACAAGCATGCAGAGAAGAATTCAATAGCCTGGGTTGTTCCTGGGATTGGTGA GCTTTAAAATCTCCTGTGATGTCAAGAAGAGGAAAGCCTTCACATCCCAGGTTTGGCCAT CACATCCCCGAATTCAGCTGCATTGGCTGAATGTTAAATGGTTTATGCCCAGCTAGTGGG AAGGTGAATAATACGTAAAGGAGCTGGGATCTACACATACGTTGGATGACACAGACATTG TACTTCAGAGTCTCGAAGCATTTTGGAGCATCTGGGCTCACTCCTGGCATCTCGGATCTA TTGCCCTGCAGTCCCCTCCGGGCACTGGAGCAGCGTCACGGTACAGACAAGTAGAGCCAG CACAGAGTGCAGCCACTGAGCCGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGACCTGAAGATTGGAAGTGACCTGGCAAGGGAGAAGAAGGACAAGCAAGAGTGAAAGAG TAGCAAACCCTGAAGTGGTTCCAAGGGTTTACCTCGTGACCACAGAGACCCATCTCTGCC AGAGAGGAACAAGCATGCAGAGAAGAATTCAATAGCCTGGGTTGTTCCTGGGATTGGTGA GCTTTAAAATCTCCTGTGATGTCAAGAAGAGGAAAGCCTTCACATCCCAGGTTTGGCCAT CACATCCCCGAATTCAGCTGCATTGGCTGAATGTTAAATGGTTTATGCCCAGCTAGTGGG AAGGTGAATAATACGTAAAGGAGCTGGGATCTACACATACGTTGGATGACACAGACATTG TACTTCAGAGTCTCGAAGCATTTTGGAGCATCTGGGCTCACTCCTGGCATCTCGGATCTA TTGCCCTGCAGTCCCCTCCGGGCACTGGAGCAGCGTCACGGTACAGACAAGTAGAGCCAG CACAGAGTGCAGCCACTGAGCCGA |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 70-207, gnl|bosTau2|chr29 (22833701-22833558) | |
| 70-207, gnl|Hg17|chr11 (128656146-128656282) | |
| 211-386, gnl|bosTau2|chr29 (22833142-22832968) | |
| 211-386, gnl|canFam2|chr5 (8398671-8398418) | |
| 211-386, gnl|echTel1|scaffold_62801 (855-608) | |
| 211-386, gnl|hg17|chr11 (128656356-128656597) | |
| 211-386, gnl|Hg17|chr11 (128656381-128656558) | |
| 211-386, gnl|loxAfr1|scaffold_37665 (1675-1427) | |
| 211-386, gnl|mm7|chr9 (31931942-31931668) | |
| 211-386, gnl|Mm7|chr9 (31931899-31931700) | |
| 211-386, gnl|panTro1|chr9 (130792084-130792325) | |
| 211-386, gnl|rheMac2|chr14 (127409572-127409804) | |
| 211-386, gnl|rn3|chr8 (31767002-31766783) | |
| 387-504, gnl|bosTau2|chr29 (22832454-22832337) | |
| 387-504, gnl|canFam2|chr5 (8398201-8397819) | |
| 387-504, gnl|dasNov1|scaffold_9932 (48254-47885) | |
| 387-504, gnl|echTel1|scaffold_62801 (404-4) | |
| 387-504, gnl|hg17|chr11 (128656818-128657198) | |
| 387-504, gnl|Hg17|chr11 (128657090-128657207) | |
| 387-504, gnl|loxAfr1|scaffold_37665 (1210-799) | |
| 387-504, gnl|mm7|chr9 (31931464-31931075) | |
| 387-504, gnl|Mm7|chr9 (31931180-31931064) | |
| 387-504, gnl|monDom2|scaffold_15 (17858438-17858838) | |
| 387-504, gnl|oryCun1|scaffold_141988 (839-446) | |
| 387-504, gnl|panTro1|chr9 (130792539-130792918) | |
| 387-504, gnl|rheMac2|chr14 (127410025-127410398) | |
| 387-504, gnl|rn3|chr8 (31766566-31766134) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 70-207, gnl|bosTau2|chr29 (22833701-22833558) | |
| 70-207, gnl|Hg17|chr11 (128656146-128656282) | |
| 211-386, gnl|bosTau2|chr29 (22833142-22832968) | |
| 211-386, gnl|canFam2|chr5 (8398671-8398418) | |
| 211-386, gnl|echTel1|scaffold_62801 (855-608) | |
| 211-386, gnl|hg17|chr11 (128656356-128656597) | |
| 211-386, gnl|Hg17|chr11 (128656381-128656558) | |
| 211-386, gnl|loxAfr1|scaffold_37665 (1675-1427) | |
| 211-386, gnl|mm7|chr9 (31931942-31931668) | |
| 211-386, gnl|Mm7|chr9 (31931899-31931700) | |
| 211-386, gnl|panTro1|chr9 (130792084-130792325) | |
| 211-386, gnl|rheMac2|chr14 (127409572-127409804) | |
| 211-386, gnl|rn3|chr8 (31767002-31766783) | |
| 387-504, gnl|bosTau2|chr29 (22832454-22832337) | |
| 387-504, gnl|canFam2|chr5 (8398201-8397819) | |
| 387-504, gnl|dasNov1|scaffold_9932 (48254-47885) | |
| 387-504, gnl|echTel1|scaffold_62801 (404-4) | |
| 387-504, gnl|hg17|chr11 (128656818-128657198) | |
| 387-504, gnl|Hg17|chr11 (128657090-128657207) | |
| 387-504, gnl|loxAfr1|scaffold_37665 (1210-799) | |
| 387-504, gnl|mm7|chr9 (31931464-31931075) | |
| 387-504, gnl|Mm7|chr9 (31931180-31931064) | |
| 387-504, gnl|monDom2|scaffold_15 (17858438-17858838) | |
| 387-504, gnl|oryCun1|scaffold_141988 (839-446) | |
| 387-504, gnl|panTro1|chr9 (130792539-130792918) | |
| 387-504, gnl|rheMac2|chr14 (127410025-127410398) | |
| 387-504, gnl|rn3|chr8 (31766566-31766134) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| duo (0.172801) | |
| fhi (0.169578) | |
| cst (0.140036) | |
| bla (0.124347) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| duo (0.172801) | |
| fhi (0.169578) | |
| cst (0.140036) | |
| bla (0.124347) |