Non-Coding RNA Search

Ss1.1-rcst24_g13.5

Sequence:


               
               CTGCAGGCGGACGAGGCTTCAAAAATATGTCTGCTGTAGAAATAACTTGAAAAAAATTTT
TAAACAATGGCCAGCCACCAAATTGTGGACACTGTTTTTACTGCTAGGTATCAACTACCA
CTGTTTAAAATTGAAAACATTTTTGTTCTATCTCAACTAGATATACATAAGTTCTCACTG
TAGTCTCTATCAATCATAATAGTTGAGCAGTTTAAACAAGACATAAAATGGGTGTTTTTG
GAATGCTTTGAAACTACTCTTAGTTTTTAACTGCTTTTTAATATGAAAATTGCAGCTGTA
AATTATGTATTTTTCATATTTTACACAACTGCTCTAAACTACTGATTGACTAGAACATTT
TCTGGGGTGGGGGTGGGGGCTCTCTCTCCATACTGCTGGTCCTCTTACTAAAATCCTTTT
TTAAAGAAATGACCTGTGACATTTATTCACCAAAGGAATTAATATACCAGGTCAAAGATT
AACAATGCTCTAGTATAGATTAATAGGTCCTATATAGCCTCAATTCAGTTTTTTAATATG
AATGATAGTATTTTTGAACATACCTCTCTCTCTACGTAGAGATACCATACAATACATTAA
AATGATGCAGAGGAAAGTAAAGGAAAGCCAAATCATTTTGGTACATTTTATGGTTTAAGA
AGAAGATAGGATGAAATATCGTCAAATTTAGAAGCAGCAACTATTCAAAATCTGCAGTCT
GATAACACCTTATGCATCACTTCCTTGAATTTAGGAAATCATTGAAAACTCCTGTGCACT
TAGATTTAATTAATTTAAAATGTGAGTTGCATTATTCAGAGACATAAGATGTTTACCTGA
GACATGGCTCTAGAGAAGGCAGTTAACAGCTATGTAAGAATAAAAAGCTATTTCTCTGTA
ATGTGTTGTTGAATGACAACCAGAATACCAAGAATGTGTAAATAGGAAAATGCTACTTCT
CTGTTCCCTGCCTACCCTCTGTGGGGCGCCGCCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGCGGACGAGGCTTCAAAAATATGTCTGCTGTAGAAATAACTTGAAAAAAATTTT
TAAACAATGGCCAGCCACCAAATTGTGGACACTGTTTTTACTGCTAGGTATCAACTACCA
CTGTTTAAAATTGAAAACATTTTTGTTCTATCTCAACTAGATATACATAAGTTCTCACTG
TAGTCTCTATCAATCATAATAGTTGAGCAGTTTAAACAAGACATAAAATGGGTGTTTTTG
GAATGCTTTGAAACTACTCTTAGTTTTTAACTGCTTTTTAATATGAAAATTGCAGCTGTA
AATTATGTATTTTTCATATTTTACACAACTGCTCTAAACTACTGATTGACTAGAACATTT
TCTGGGGTGGGGGTGGGGGCTCTCTCTCCATACTGCTGGTCCTCTTACTAAAATCCTTTT
TTAAAGAAATGACCTGTGACATTTATTCACCAAAGGAATTAATATACCAGGTCAAAGATT
AACAATGCTCTAGTATAGATTAATAGGTCCTATATAGCCTCAATTCAGTTTTTTAATATG
AATGATAGTATTTTTGAACATACCTCTCTCTCTACGTAGAGATACCATACAATACATTAA
AATGATGCAGAGGAAAGTAAAGGAAAGCCAAATCATTTTGGTACATTTTATGGTTTAAGA
AGAAGATAGGATGAAATATCGTCAAATTTAGAAGCAGCAACTATTCAAAATCTGCAGTCT
GATAACACCTTATGCATCACTTCCTTGAATTTAGGAAATCATTGAAAACTCCTGTGCACT
TAGATTTAATTAATTTAAAATGTGAGTTGCATTATTCAGAGACATAAGATGTTTACCTGA
GACATGGCTCTAGAGAAGGCAGTTAACAGCTATGTAAGAATAAAAAGCTATTTCTCTGTA
ATGTGTTGTTGAATGACAACCAGAATACCAAGAATGTGTAAATAGGAAAATGCTACTTCT
CTGTTCCCTGCCTACCCTCTGTGGGGCGCCGCCTGC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               14-996, gnl|bosTau2|chr14 (20855452-20856444)
               

               
               14-996, gnl|Hg17|chr8 (74867184-74866247)
               

               
               14-996, gnl|Mm7|chr1 (16758716-16757855)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-996, gnl|bosTau2|chr14 (20855452-20856444)
               

               
               14-996, gnl|Hg17|chr8 (74867184-74866247)
               

               
               14-996, gnl|Mm7|chr1 (16758716-16757855)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               liv (0.146284)
               

               
               cst (0.140036)
               

               
               cbl (0.114797)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               cst (0.140036)
               

               
               cbl (0.114797)

	14-996, gnl\|bosTau2\|chr14 (20855452-20856444)
	14-996, gnl\|Hg17\|chr8 (74867184-74866247)
	14-996, gnl\|Mm7\|chr1 (16758716-16757855)