Non-Coding RNA Search

Ss1.1-rcst24_j20.5

Sequence:


               
               CTCAGATTTAACCTCAGGAACTTCCATAAGCAACCTAAAAAGAAAAAGAAAAAAAAAACA
AAAACAGTGGGGTCAGCCCCCTGAACTTGCAGGGGAATAGTGGACTTCTGCAAAAAGCCT
CTAGCCCGGGCTTGTAGAGGCAAAGGGCTGCATGGTGGGTATCAGACTGGAGCCTACCAC
GAGGTGGTGCTTACTGCCACTGGATCTAGGTGCTTGGCAGTTATGCTACCAGGGCCACAA
AGAGGGAAGTCTTGGCTAGAGAGCCATGGAAGGAAGCTGTGAGCCCAGAGTGCCTGCCAC
TCTGATGCTCAGTCTATGGTATCTGCCTCAGATTGCTGGAGTGGATGCAATCATGACTTT
TTGTAGAGCCTTTTCCAGTTTTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCAGATTTAACCTCAGGAACTTCCATAAGCAACCTAAAAAGAAAAAGAAAAAAAAAACA
AAAACAGTGGGGTCAGCCCCCTGAACTTGCAGGGGAATAGTGGACTTCTGCAAAAAGCCT
CTAGCCCGGGCTTGTAGAGGCAAAGGGCTGCATGGTGGGTATCAGACTGGAGCCTACCAC
GAGGTGGTGCTTACTGCCACTGGATCTAGGTGCTTGGCAGTTATGCTACCAGGGCCACAA
AGAGGGAAGTCTTGGCTAGAGAGCCATGGAAGGAAGCTGTGAGCCCAGAGTGCCTGCCAC
TCTGATGCTCAGTCTATGGTATCTGCCTCAGATTGCTGGAGTGGATGCAATCATGACTTT
TTGTAGAGCCTTTTCCAGTTTTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               167-401, gnl|bosTau2|chr26 (13397925-13398163)
               

               
               167-401, gnl|Hg17|chr10 (102743901-102744137)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               167-401, gnl|bosTau2|chr26 (13397925-13398163)
               

               
               167-401, gnl|Hg17|chr10 (102743901-102744137)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cst (0.280073)
               

               
               eye (0.170503)
               

               
               che (0.136314)
               

               
               cov (0.132153)
               

               
               nbm (0.0993246)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.280073)
               

               
               eye (0.170503)
               

               
               che (0.136314)
               

               
               cov (0.132153)
               

               
               nbm (0.0993246)

	167-401, gnl\|bosTau2\|chr26 (13397925-13398163)
	167-401, gnl\|Hg17\|chr10 (102743901-102744137)

	cst (0.280073)
	eye (0.170503)
	che (0.136314)
	cov (0.132153)
	nbm (0.0993246)