Non-Coding RNA Search

Ss1.1-rcst31_d11.5

Sequence:


               
               TCAGATGACTTTCTGGCATCCTTGAGCCACTTTTCTGTGTAATACAGGCTTTAGATTAGT
GCCTTATACTATTTTGGTTTGGGCCACTGGATGTCACAGCTGCTGCTAGGATTTTGACAG
GCTGGTTCTATATTGCTTTGTGGTGGGACCACAGTGAAAGGGGAATGGGATGGATATCAA
TAAGGAAGATTCTGGAAATGCCTTGGCCATTCCTTGCCTTTCAATCTGATATTTTAAGCA
AGCATATATAAGGAGAAACTTGTGCTAAAACGCCTCCTTCATTTTTTGTTCTATTTCCTA
AGCCAAAACGGAACTATGTCTCTCTAAACTTGTGCTGAGTGCTCATAGAAAGCTGAGGTA
GGTTTGAACTCCGAGCTTGGCTTCCCTGTAATGTCAGAGGTTGAAATGAATCTCAGCAGA
AAGGGGAGGATGTCTCTTAAAAACCTCCAACTTCACTCGTCATGTTGTGTACCCGTCACT
GCTGGCATACTTCAAAAGATTTTATTTTGGTCTTTTTAAAGCTAGAAGGAAGTACTGTGT
AAGCCATTGCATTTTCAATCAAAAGGGAGAAATTTTATTGTTCTTGAAAATTTAAGTGTT
AGTGGATTTTAAGATAGTTATGTAATTCAGTTCTTTGAGATTTTTAGAAAAGGGATTTTC
AGTAATGTGTCACCTCTGCCTTTTAAATATTTGGTGTGCCAATTGTTTTAAAGTAAAAAA
AATCAAATGCTTCTATTTTATTTTTTATTTCAGAAGCATTCTGTTTATCAACATTGTCTT
GTCTACTGAATAGAAAATTTTCTTTGAGAATATTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGATGACTTTCTGGCATCCTTGAGCCACTTTTCTGTGTAATACAGGCTTTAGATTAGT
GCCTTATACTATTTTGGTTTGGGCCACTGGATGTCACAGCTGCTGCTAGGATTTTGACAG
GCTGGTTCTATATTGCTTTGTGGTGGGACCACAGTGAAAGGGGAATGGGATGGATATCAA
TAAGGAAGATTCTGGAAATGCCTTGGCCATTCCTTGCCTTTCAATCTGATATTTTAAGCA
AGCATATATAAGGAGAAACTTGTGCTAAAACGCCTCCTTCATTTTTTGTTCTATTTCCTA
AGCCAAAACGGAACTATGTCTCTCTAAACTTGTGCTGAGTGCTCATAGAAAGCTGAGGTA
GGTTTGAACTCCGAGCTTGGCTTCCCTGTAATGTCAGAGGTTGAAATGAATCTCAGCAGA
AAGGGGAGGATGTCTCTTAAAAACCTCCAACTTCACTCGTCATGTTGTGTACCCGTCACT
GCTGGCATACTTCAAAAGATTTTATTTTGGTCTTTTTAAAGCTAGAAGGAAGTACTGTGT
AAGCCATTGCATTTTCAATCAAAAGGGAGAAATTTTATTGTTCTTGAAAATTTAAGTGTT
AGTGGATTTTAAGATAGTTATGTAATTCAGTTCTTTGAGATTTTTAGAAAAGGGATTTTC
AGTAATGTGTCACCTCTGCCTTTTAAATATTTGGTGTGCCAATTGTTTTAAAGTAAAAAA
AATCAAATGCTTCTATTTTATTTTTTATTTCAGAAGCATTCTGTTTATCAACATTGTCTT
GTCTACTGAATAGAAAATTTTCTTTGAGAATATTAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               2-813, gnl|bosTau2|chr22 (18385073-18385905)
               

               
               2-813, gnl|Hg17|chr3 (5233657-5234435)
               

               
               2-813, gnl|Mm7|chr6 (108950505-108951280)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-813, gnl|bosTau2|chr22 (18385073-18385905)
               

               
               2-813, gnl|Hg17|chr3 (5233657-5234435)
               

               
               2-813, gnl|Mm7|chr6 (108950505-108951280)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               pan (0.23596)
               

               
               cmu (0.186393)
               

               
               cst (0.140036)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pan (0.23596)
               

               
               cmu (0.186393)
               

               
               cst (0.140036)

	2-813, gnl\|bosTau2\|chr22 (18385073-18385905)
	2-813, gnl\|Hg17\|chr3 (5233657-5234435)
	2-813, gnl\|Mm7\|chr6 (108950505-108951280)