Ss1.1-rcst35_k21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTGTCATTTCTG------------GTCCGCCAGCTCTCNGAGCCCTGGCCCAGTTTGGCT TTATCAGCTGAATGCTCTCCCAGCCTGACCTTGGAAGGACACCCGGAGGACCATTTTTTC ACCTTATTTAGCCAGCTGTGTTTTCAGCCTTTAGAAAACCTGCTCAGTAGCCATCAGAAA ATGACCTGGGAAAATGAAAATACCCTTGAGAAATACATTCTAAAACCAGGAAGAACTGTT GATTTACCTGTTTTCTTTTGGGCACCAATGGTGATCTGTGGGGATCTCAGATCTTGGCAT CTAAAACTGTCCAGGAGGTTCACCCAGGAGAACCCCCATTCGACTTGGAGCTGTTCTACG TCAAGTATAGAAATTTTTCCTACTTACACTGTAAATGGGCCACAATGGAGGAGCTCGAAA AGGATCCTCGCATCGCACAGAAGATCAAGCGATTTAGGAATAAACAAGCCCAGATGAAGC ACATTTTTACTGAGCCTGACGAAGACTTGTTCAACCCAGACTATGTGGAGGTCGATCGCA TCTTGGAGGTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTGTCATTTCTG------------GTCCGCCAGCTCTCNGAGCCCTGGCCCAGTTTGGCT TTATCAGCTGAATGCTCTCCCAGCCTGACCTTGGAAGGACACCCGGAGGACCATTTTTTC ACCTTATTTAGCCAGCTGTGTTTTCAGCCTTTAGAAAACCTGCTCAGTAGCCATCAGAAA ATGACCTGGGAAAATGAAAATACCCTTGAGAAATACATTCTAAAACCAGGAAGAACTGTT GATTTACCTGTTTTCTTTTGGGCACCAATGGTGATCTGTGGGGATCTCAGATCTTGGCAT CTAAAACTGTCCAGGAGGTTCACCCAGGAGAACCCCCATTCGACTTGGAGCTGTTCTACG TCAAGTATAGAAATTTTTCCTACTTACACTGTAAATGGGCCACAATGGAGGAGCTCGAAA AGGATCCTCGCATCGCACAGAAGATCAAGCGATTTAGGAATAAACAAGCCCAGATGAAGC ACATTTTTACTGAGCCTGACGAAGACTTGTTCAACCCAGACTATGTGGAGGTCGATCGCA TCTTGGAGGTGG |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 19-364, gnl|bosTau2|chr13 (51698305-51697943) | |
| 19-364, gnl|Hg17|chr20 (39560580-39560222) | |
| 19-364, gnl|Mm7|chr2 (160771139-160770793) | |
| 365-482, gnl|bosTau2|chr13 (51697279-51697162) | |
| 365-482, gnl|canFam2|chr24 (32469982-32470133) | |
| 365-482, gnl|danRer3|chrUn (35736058-35736190) | |
| 365-482, gnl|dasNov1|scaffold_9433 (92593-92744) | |
| 365-482, gnl|echTel1|scaffold_314428 (111337-111189) | |
| 365-482, gnl|fr1|chrUn (10467785-10467924) | |
| 365-482, gnl|galGal2|chr20 (600958-601089) | |
| 365-482, gnl|hg17|chr20 (39559420-39559571) | |
| 365-482, gnl|Hg17|chr20 (39559555-39559438) | |
| 365-482, gnl|loxAfr1|scaffold_177551 (4-120) | |
| 365-482, gnl|mm7|chr2 (160770050-160770201) | |
| 365-482, gnl|Mm7|chr2 (160770185-160770068) | |
| 365-482, gnl|monDom2|scaffold_6 (7220439-7220590) | |
| 365-482, gnl|oryCun1|scaffold_202653 (125950-125822) | |
| 365-482, gnl|panTro1|chr21 (42000941-42001092) | |
| 365-482, gnl|rheMac2|chr10 (22956879-22956728) | |
| 365-482, gnl|rn3|chr3 (151727325-151727476) | |
| 365-482, gnl|tetNig1|chrUn_random (5741465-5741621) | |
| 365-482, gnl|xenTro1|scaffold_35 (2455211-2455075) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 19-364, gnl|bosTau2|chr13 (51698305-51697943) | |
| 19-364, gnl|Hg17|chr20 (39560580-39560222) | |
| 19-364, gnl|Mm7|chr2 (160771139-160770793) | |
| 365-482, gnl|bosTau2|chr13 (51697279-51697162) | |
| 365-482, gnl|canFam2|chr24 (32469982-32470133) | |
| 365-482, gnl|danRer3|chrUn (35736058-35736190) | |
| 365-482, gnl|dasNov1|scaffold_9433 (92593-92744) | |
| 365-482, gnl|echTel1|scaffold_314428 (111337-111189) | |
| 365-482, gnl|fr1|chrUn (10467785-10467924) | |
| 365-482, gnl|galGal2|chr20 (600958-601089) | |
| 365-482, gnl|hg17|chr20 (39559420-39559571) | |
| 365-482, gnl|Hg17|chr20 (39559555-39559438) | |
| 365-482, gnl|loxAfr1|scaffold_177551 (4-120) | |
| 365-482, gnl|mm7|chr2 (160770050-160770201) | |
| 365-482, gnl|Mm7|chr2 (160770185-160770068) | |
| 365-482, gnl|monDom2|scaffold_6 (7220439-7220590) | |
| 365-482, gnl|oryCun1|scaffold_202653 (125950-125822) | |
| 365-482, gnl|panTro1|chr21 (42000941-42001092) | |
| 365-482, gnl|rheMac2|chr10 (22956879-22956728) | |
| 365-482, gnl|rn3|chr3 (151727325-151727476) | |
| 365-482, gnl|tetNig1|chrUn_random (5741465-5741621) | |
| 365-482, gnl|xenTro1|scaffold_35 (2455211-2455075) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cst (0.140036) |