Non-Coding RNA Search

Ss1.1-rcst35_m14.5

Sequence:


               
               TTTTGGGGCTTCCTTCTCCGTTTCCGACCGGGTCCGGTTCCATATTCACTGCCTCCACTC
TCCGACTTCTCCCGGTACTCATCTCGCTCAGAGCCAAATTCCTCCTCGCTGTCAAGCTTC
TTGCGTTTTCGGGGTTTCCCTGGCTTGTTCTCCTTCTGCTTCTTGGGTCCTCGTTTTCTC
TTCTTCACACCCAATGCTGAAGGCAGCAGCCGAATGTCATCTTTATCTGGCGGCGGGGGC
GGCGGCGGCGGCGGCGGGGGCGGCGGCGGCGGTGGCGGGAAGAGGTGGCAGCCGGGGGGG
CTGTGGCGGTCGCGGCCCCGATCGTGGCCCGGCCCGCGCCCGAGTACTCCCTCGTCGTCG
TCCTCCTCGTAGTCCTCGTCGGCCGCCTCCACCTCCTCCTCCTCCTCGTCGCCCTCTTCT
TCCTCCTCTTCTTCTAGTTCTAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTGGGGCTTCCTTCTCCGTTTCCGACCGGGTCCGGTTCCATATTCACTGCCTCCACTC
TCCGACTTCTCCCGGTACTCATCTCGCTCAGAGCCAAATTCCTCCTCGCTGTCAAGCTTC
TTGCGTTTTCGGGGTTTCCCTGGCTTGTTCTCCTTCTGCTTCTTGGGTCCTCGTTTTCTC
TTCTTCACACCCAATGCTGAAGGCAGCAGCCGAATGTCATCTTTATCTGGCGGCGGGGGC
GGCGGCGGCGGCGGCGGGGGCGGCGGCGGCGGTGGCGGGAAGAGGTGGCAGCCGGGGGGG
CTGTGGCGGTCGCGGCCCCGATCGTGGCCCGGCCCGCGCCCGAGTACTCCCTCGTCGTCG
TCCTCCTCGTAGTCCTCGTCGGCCGCCTCCACCTCCTCCTCCTCCTCGTCGCCCTCTTCT
TCCTCCTCTTCTTCTAGTTCTAGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               O35327_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               O35327_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-113, gnl|bosTau2|chr19 (15316949-15317057)
               

               
               5-113, gnl|Hg17|chr17 (7734722-7734614)
               

               
               5-113, gnl|Mm7|chr11 (69445609-69445717)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-113, gnl|bosTau2|chr19 (15316949-15317057)
               

               
               5-113, gnl|Hg17|chr17 (7734722-7734614)
               

               
               5-113, gnl|Mm7|chr11 (69445609-69445717)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cst (0.140036)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)
               

               
               ecc (0.115035)

	5-113, gnl\|bosTau2\|chr19 (15316949-15317057)
	5-113, gnl\|Hg17\|chr17 (7734722-7734614)
	5-113, gnl\|Mm7\|chr11 (69445609-69445717)