Non-Coding RNA Search

Ss1.1-rcst37_o7.5

Sequence:


               
               TTTATTTACTTGTTGAATTTTATTACATCTAGACAGTTCTTGACAGCACCAGGCACTTGC
TGGGCGCTGGGTGCACAGAGATGGATACAGTGGCCGCCGAGCATGACAAACAGGTTCCAC
TGCACAAAGGGCTGCCACGCAGAGGGGGAGGAGCTACGGCCAAAGGATGGGCGCCGTGGG
GGGAGGCCCTTCCGGCTGGCGGGCCGGGATGCGACGCAGGCTGAGGGGCTCAGGAGGGCC
TCCCAGAGCTGGTGGGGGAGGAGCACAGACTGTCCCTGCCTGAGGATTTGGGGAGGAAGT
GGGTTTGGCTCTCCCATTCCGGAAGATCCGGAGGTGAGGCTGCCAGCGGGGAAATGTGCT
CGAGGTGTGTGCGGTAACCTGGCCAGTCTAAGCCGAGTGGGGCTGCGGCGGAGGGGGAGT
GTGCAGGGCGTGGGCACGGACAGGTGATGGGTTTATGGTGGAGGGCGAGGTCAGGCTTCC
TCCTGGACGTCAAGGCAGGTCGCGTGTGGGCAGGACTGACCTCTCGTTAATGTTGTCTGT
TCGGAGGGTGTAGACTCGGTCAATGTGAGAAATGTGGAAGACAGGCTCATCGCTGGAAGG
GTCTGTGGGCAGTTTCACCAAGGCTTCATTCAGGAAAATCGGCTGAAAGAATTAGGGCCA
AAACACGAGCTGTGAAATGGGCCAGAGCACGCCCCCCGCCTCCGTCCAGAGAGCTGTCTG
TCATGAGGAGCCCTTTGGGAAGGAGAGGGGGGCTGGCTTAGGAGAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTATTTACTTGTTGAATTTTATTACATCTAGACAGTTCTTGACAGCACCAGGCACTTGC
TGGGCGCTGGGTGCACAGAGATGGATACAGTGGCCGCCGAGCATGACAAACAGGTTCCAC
TGCACAAAGGGCTGCCACGCAGAGGGGGAGGAGCTACGGCCAAAGGATGGGCGCCGTGGG
GGGAGGCCCTTCCGGCTGGCGGGCCGGGATGCGACGCAGGCTGAGGGGCTCAGGAGGGCC
TCCCAGAGCTGGTGGGGGAGGAGCACAGACTGTCCCTGCCTGAGGATTTGGGGAGGAAGT
GGGTTTGGCTCTCCCATTCCGGAAGATCCGGAGGTGAGGCTGCCAGCGGGGAAATGTGCT
CGAGGTGTGTGCGGTAACCTGGCCAGTCTAAGCCGAGTGGGGCTGCGGCGGAGGGGGAGT
GTGCAGGGCGTGGGCACGGACAGGTGATGGGTTTATGGTGGAGGGCGAGGTCAGGCTTCC
TCCTGGACGTCAAGGCAGGTCGCGTGTGGGCAGGACTGACCTCTCGTTAATGTTGTCTGT
TCGGAGGGTGTAGACTCGGTCAATGTGAGAAATGTGGAAGACAGGCTCATCGCTGGAAGG
GTCTGTGGGCAGTTTCACCAAGGCTTCATTCAGGAAAATCGGCTGAAAGAATTAGGGCCA
AAACACGAGCTGTGAAATGGGCCAGAGCACGCCCCCCGCCTCCGTCCAGAGAGCTGTCTG
TCATGAGGAGCCCTTTGGGAAGGAGAGGGGGGCTGGCTTAGGAGAGGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               28-751, gnl|bosTau2|chr11 (56260816-56260093)
               

               
               28-751, gnl|Hg17|chr2 (24343023-24343855)
               

               
               28-751, gnl|Mm7|chr12 (4641241-4640408)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-751, gnl|bosTau2|chr11 (56260816-56260093)
               

               
               28-751, gnl|Hg17|chr2 (24343023-24343855)
               

               
               28-751, gnl|Mm7|chr12 (4641241-4640408)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cst (0.140036)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)

	28-751, gnl\|bosTau2\|chr11 (56260816-56260093)
	28-751, gnl\|Hg17\|chr2 (24343023-24343855)
	28-751, gnl\|Mm7\|chr12 (4641241-4640408)