Non-Coding RNA Search

Ss1.1-rcte04_b15.5

Sequence:


               
               CTTACTGACACCACAACACGATCGCGTCCCTGCTGCAAAAATCCGTATTTACTAGTCGCT
GTGGCCAAACACCTGTGTGCTGACTCGCTTGCTTGCAGCCCCACTGCCGTGTAACCTCAG
TACGCTCGCGGACAAAGCACGGGCCACAAGCTGCGTTACTGCTCGACGTTCAAGAGCTCA
GATAGTCACACGCCTAATTATTAAGTCGGAGCAACACATAAGAGACCTTGATCTCAGCCC
TCCGGTTTCAGGGCAGCCTGTCTGGAGCAGCCCTGCTCCCTCCTGGAGACCCGGTAACCT
CCTGACACCCCCTCCCCGGTCGGCACCGATAACCGAGCAGCTGTATGTGTTATGTCACAG
GAACTAAATAAGATGACGTTACTCCTCATTATCACCACGACCTGAATGTGTGCTCATATT
TTTTGTTAGTTTATCCAAAATGTTCAAGATCCCAACAAACTTTATTTTCTAAACCTGGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTACTGACACCACAACACGATCGCGTCCCTGCTGCAAAAATCCGTATTTACTAGTCGCT
GTGGCCAAACACCTGTGTGCTGACTCGCTTGCTTGCAGCCCCACTGCCGTGTAACCTCAG
TACGCTCGCGGACAAAGCACGGGCCACAAGCTGCGTTACTGCTCGACGTTCAAGAGCTCA
GATAGTCACACGCCTAATTATTAAGTCGGAGCAACACATAAGAGACCTTGATCTCAGCCC
TCCGGTTTCAGGGCAGCCTGTCTGGAGCAGCCCTGCTCCCTCCTGGAGACCCGGTAACCT
CCTGACACCCCCTCCCCGGTCGGCACCGATAACCGAGCAGCTGTATGTGTTATGTCACAG
GAACTAAATAAGATGACGTTACTCCTCATTATCACCACGACCTGAATGTGTGCTCATATT
TTTTGTTAGTTTATCCAAAATGTTCAAGATCCCAACAAACTTTATTTTCTAAACCTGGCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-477, gnl|bosTau2|chr17 (26898971-26898504)
               

               
               6-477, gnl|Hg17|chr12 (122946337-122945837)
               

               
               6-477, gnl|Mm7|chr5 (124069642-124069227)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-477, gnl|bosTau2|chr17 (26898971-26898504)
               

               
               6-477, gnl|Hg17|chr12 (122946337-122945837)
               

               
               6-477, gnl|Mm7|chr5 (124069642-124069227)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cte (0.29274)
               

               
               hyp (0.142837)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               hyp (0.142837)
               

               
               ecc (0.115035)

	6-477, gnl\|bosTau2\|chr17 (26898971-26898504)
	6-477, gnl\|Hg17\|chr12 (122946337-122945837)
	6-477, gnl\|Mm7\|chr5 (124069642-124069227)