Non-Coding RNA Search

Ss1.1-rcte04_h17.5

Sequence:


               
               GAGAGTCTACCGAACCATAGGGAAACTGTTTCACTTGGCTTGAGAATCCAACTACATGAC
ATGGGGGGAGTATAGTCTCTCTGCATTTTCTTTTTCTCCTCTTCATCCAGGAGCAGAGTT
AGAACTGCTGCCTCCACTCCTGGTTCTATCACTGACTCACAGCACCTTCCCTTTTTGTTT
CAATTTAGCCCCTTGTTAAAACAAAGATAGCAATAGTCTCTTTCTGGGTAATTGTAAGAA
TTCCTGATAAATTCTAGTAATGCATCTGGTAGTAGGAACATGTTGGGGAAATAGAACTAA
AAGTAAAATGAACTGCCAATCCAGATAATCCTCTTTGTAATTGCAGAAAAACAATTTTAC
TATTGAATCGGCACGAGATTAGGCCGCTAAAGAGATTGCAAAGACAAGGAAATCTCCCCC
TTGGCAGATATAATCCATTATTTACACGTTAACTGTCCGTATCCAAAGAAAAATAAAACT
CCTCATATCTTTATGACAAACAGAAAGTTGCCACCTGGAGCCAAGTACTTAGGCTAAACT
CCGAGAGTCAGGGGGACAAGTGTCATCCTAGATGCTCACATTCCACAGAGAAATTACAAA
TACTTCTTGTCACCTGAATGACTCCAGTTTCTCTCTAGTTTTATAGACCTAATTTCTCTT
TCCTATTCCTAAGACTCACTAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAGTCTACCGAACCATAGGGAAACTGTTTCACTTGGCTTGAGAATCCAACTACATGAC
ATGGGGGGAGTATAGTCTCTCTGCATTTTCTTTTTCTCCTCTTCATCCAGGAGCAGAGTT
AGAACTGCTGCCTCCACTCCTGGTTCTATCACTGACTCACAGCACCTTCCCTTTTTGTTT
CAATTTAGCCCCTTGTTAAAACAAAGATAGCAATAGTCTCTTTCTGGGTAATTGTAAGAA
TTCCTGATAAATTCTAGTAATGCATCTGGTAGTAGGAACATGTTGGGGAAATAGAACTAA
AAGTAAAATGAACTGCCAATCCAGATAATCCTCTTTGTAATTGCAGAAAAACAATTTTAC
TATTGAATCGGCACGAGATTAGGCCGCTAAAGAGATTGCAAAGACAAGGAAATCTCCCCC
TTGGCAGATATAATCCATTATTTACACGTTAACTGTCCGTATCCAAAGAAAAATAAAACT
CCTCATATCTTTATGACAAACAGAAAGTTGCCACCTGGAGCCAAGTACTTAGGCTAAACT
CCGAGAGTCAGGGGGACAAGTGTCATCCTAGATGCTCACATTCCACAGAGAAATTACAAA
TACTTCTTGTCACCTGAATGACTCCAGTTTCTCTCTAGTTTTATAGACCTAATTTCTCTT
TCCTATTCCTAAGACTCACTAGGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               4-588, gnl|bosTau2|chr10 (61129601-61130203)
               

               
               4-588, gnl|Hg17|chr14 (76927324-76928564)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-588, gnl|bosTau2|chr10 (61129601-61130203)
               

               
               4-588, gnl|Hg17|chr14 (76927324-76928564)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cte (0.58548)
               

               
               clu (0.119646)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.58548)
               

               
               clu (0.119646)

	4-588, gnl\|bosTau2\|chr10 (61129601-61130203)
	4-588, gnl\|Hg17\|chr14 (76927324-76928564)