Non-Coding RNA Search

Ss1.1-rcte04_l9.5

Sequence:


               
               GTGAAATTGGGTTGACAAGTGAAGAGATTGCTTCTTTTGAATACTCAGGTTATGTTATGA
GTGGTAGCAGGCATCGCAGAATGGAGGCTGTTCGACTGCGCAAAGAGAACCAGATCTATA
GTGCTGATGAGAAGAGAGCCCTTGCATCCTTTAACCAAGAAGAGAGACGGAAGAGAGAGA
ATAAGATTCTAGCCAGTTTCCGAGAGATGGTGTATCGAAAGACAAAAGGGAAAGAGGACA
AATAAGGACTTCTGTTTTGAAGCAGGACTTTTAACAATAGTTTTATACGACCCAAATTAA
AAGGCTTTATGGTGCTAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAAATTGGGTTGACAAGTGAAGAGATTGCTTCTTTTGAATACTCAGGTTATGTTATGA
GTGGTAGCAGGCATCGCAGAATGGAGGCTGTTCGACTGCGCAAAGAGAACCAGATCTATA
GTGCTGATGAGAAGAGAGCCCTTGCATCCTTTAACCAAGAAGAGAGACGGAAGAGAGAGA
ATAAGATTCTAGCCAGTTTCCGAGAGATGGTGTATCGAAAGACAAAAGGGAAAGAGGACA
AATAAGGACTTCTGTTTTGAAGCAGGACTTTTAACAATAGTTTTATACGACCCAAATTAA
AAGGCTTTATGGTGCTAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-317, gnl|bosTau2|chr23 (25714933-25714620)
               

               
               1-317, gnl|Hg17|chr6 (28336093-28336417)
               

               
               1-317, gnl|Mm7|chr13 (20833487-20833153)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-317, gnl|bosTau2|chr23 (25714933-25714620)
               

               
               1-317, gnl|Hg17|chr6 (28336093-28336417)
               

               
               1-317, gnl|Mm7|chr13 (20833487-20833153)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cte (0.29274)
               

               
               sag (0.182715)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               sag (0.182715)

	1-317, gnl\|bosTau2\|chr23 (25714933-25714620)
	1-317, gnl\|Hg17\|chr6 (28336093-28336417)
	1-317, gnl\|Mm7\|chr13 (20833487-20833153)