Non-Coding RNA Search

Ss1.1-rcte05_c11.5

Sequence:


               
               CTGGTAGATTATGACAGCTCTGATGATTCTGAAGACGAATCCACAAACCAGCCTTTAACA
AACAGTGGACTAACATCTTTACACCAAGAAGCAATGAAGAAAATTCAGGACACAGTTGGA
ACAAGTAGGGATAAAAAAGAATTTAGCCTGGAGCCTCAGTCAAGGCTTCTGGTTCCCAAA
GAATCTGATACTCCCTCCCCTGTTGATAGTGACATGACCCCAAATAACACTGCCTCTGAG
GTGGAACTGTCTTACAAAACAGTAAAGTGCTTTGAAGAACTACAAGGTGCCATTTACCGT
TTGCAGAAGAGACATCTATTTCCATATAATCCCACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGTAGATTATGACAGCTCTGATGATTCTGAAGACGAATCCACAAACCAGCCTTTAACA
AACAGTGGACTAACATCTTTACACCAAGAAGCAATGAAGAAAATTCAGGACACAGTTGGA
ACAAGTAGGGATAAAAAAGAATTTAGCCTGGAGCCTCAGTCAAGGCTTCTGGTTCCCAAA
GAATCTGATACTCCCTCCCCTGTTGATAGTGACATGACCCCAAATAACACTGCCTCTGAG
GTGGAACTGTCTTACAAAACAGTAAAGTGCTTTGAAGAACTACAAGGTGCCATTTACCGT
TTGCAGAAGAGACATCTATTTCCATATAATCCCACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-336, gnl|bosTau2|chr21 (3844767-3845102)
               

               
               1-336, gnl|Hg17|chr15 (98927364-98927029)
               

               
               1-336, gnl|Mm7|chr7 (62572246-62572569)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-336, gnl|bosTau2|chr21 (3844767-3845102)
               

               
               1-336, gnl|Hg17|chr15 (98927364-98927029)
               

               
               1-336, gnl|Mm7|chr7 (62572246-62572569)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cte (0.29274)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               spc (0.113366)

	1-336, gnl\|bosTau2\|chr21 (3844767-3845102)
	1-336, gnl\|Hg17\|chr15 (98927364-98927029)
	1-336, gnl\|Mm7\|chr7 (62572246-62572569)