Non-Coding RNA Search

Ss1.1-rcte05_m21.5

Sequence:


               
               TGGAACCCGCTCCCGGGACACAGCAGTCTGGTTGCCAAGGTCCAAGGACCTTAAAAAACC
TGGAGCTAGAAAGCAGTAGACTGGAGGCTTCTGCAGACTGTAGGACTCAAGGACAGGCAA
TCGAGAAGGGAAGAAGGATGTAAAGTGTGGGAGACCAAGGACACACTGGCGCCCATGAGC
ACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGCCTCTCCCCACCTCCAACT
TCGATGATATGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCATCACAGAGTTAAATATGC
ATCTGGCCTAGGAATTAGAGAAGCTGAAGGAAGATCCTGGGGAAGGTGGAGTAGCTACAG
GCCTGGCTGCAGGTCTGCCTGCTGCCCCATACCAACGAGGCTACGTAAACTCTTAGCAGT
AAATGAAAATGAGTATTTTACTGAACTGCAATTGAAAGAAGAAGCATTATAGGAGATTAA
AGACAAAATGAGAATTTTTAAAAGATTGTAAAAGAGAAGAGAGACACTATTTTGTGGCTG
AGAAAGGCTGAACCAGCAATTCAGGAAATGGAGTCCAAACCTAGAAACGTACCGCATACA
AAATCTGAAGTAGGCGGATTATAAATGATTAAGGAATGCCAGTCTATAGTAAATTGCGGT
GTTAAAATGGGATGCACAGTATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGAACCCGCTCCCGGGACACAGCAGTCTGGTTGCCAAGGTCCAAGGACCTTAAAAAACC
TGGAGCTAGAAAGCAGTAGACTGGAGGCTTCTGCAGACTGTAGGACTCAAGGACAGGCAA
TCGAGAAGGGAAGAAGGATGTAAAGTGTGGGAGACCAAGGACACACTGGCGCCCATGAGC
ACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGCCTCTCCCCACCTCCAACT
TCGATGATATGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCATCACAGAGTTAAATATGC
ATCTGGCCTAGGAATTAGAGAAGCTGAAGGAAGATCCTGGGGAAGGTGGAGTAGCTACAG
GCCTGGCTGCAGGTCTGCCTGCTGCCCCATACCAACGAGGCTACGTAAACTCTTAGCAGT
AAATGAAAATGAGTATTTTACTGAACTGCAATTGAAAGAAGAAGCATTATAGGAGATTAA
AGACAAAATGAGAATTTTTAAAAGATTGTAAAAGAGAAGAGAGACACTATTTTGTGGCTG
AGAAAGGCTGAACCAGCAATTCAGGAAATGGAGTCCAAACCTAGAAACGTACCGCATACA
AAATCTGAAGTAGGCGGATTATAAATGATTAAGGAATGCCAGTCTATAGTAAATTGCGGT
GTTAAAATGGGATGCACAGTATTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               398-684, gnl|bosTau2|chr24 (37189097-37189385)
               

               
               398-684, gnl|Hg17|chr18 (46048420-46048155)
               

               
               398-684, gnl|Mm7|chr18 (74676213-74676475)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               398-684, gnl|bosTau2|chr24 (37189097-37189385)
               

               
               398-684, gnl|Hg17|chr18 (46048420-46048155)
               

               
               398-684, gnl|Mm7|chr18 (74676213-74676475)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	398-684, gnl\|bosTau2\|chr24 (37189097-37189385)
	398-684, gnl\|Hg17\|chr18 (46048420-46048155)
	398-684, gnl\|Mm7\|chr18 (74676213-74676475)