Non-Coding RNA Search

Ss1.1-rcte09_e20.5

Sequence:


               
               GATGATGAGATTATGTTGGACACCTCGAGTGAAGCCTCCCACTGGAAACAAGCTGCAGTC
GTTTTAGATCATCCCTTCCGGGTGGAAATGGGGGATGAACTTGTTCTCCATGTCCAGCAC
CACAAAAGCAATGTCAGCATCACGGTAAAGCAGTGAAGAGCAGTTTTCCTGTGCAAAATG
TGGAAGTAGAGCAGCAAGTACACAATTCTTCTAGTCTGAGTTAGCAGCGGGATTGTAACC
GTACTGGAGGTATAAAAGATTTATTCCTTGTAATGGTCAAATACTTTTTAAAAAATTGAC
ATTAATAAAGTGTATTTAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAACCGAGACTAGTT
CTCTCTCCTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGATGAGATTATGTTGGACACCTCGAGTGAAGCCTCCCACTGGAAACAAGCTGCAGTC
GTTTTAGATCATCCCTTCCGGGTGGAAATGGGGGATGAACTTGTTCTCCATGTCCAGCAC
CACAAAAGCAATGTCAGCATCACGGTAAAGCAGTGAAGAGCAGTTTTCCTGTGCAAAATG
TGGAAGTAGAGCAGCAAGTACACAATTCTTCTAGTCTGAGTTAGCAGCGGGATTGTAACC
GTACTGGAGGTATAAAAGATTTATTCCTTGTAATGGTCAAATACTTTTTAAAAAATTGAC
ATTAATAAAGTGTATTTAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAACCGAGACTAGTT
CTCTCTCCTCTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-319, gnl|bosTau2|chr17 (5560142-5559829)
               

               
               1-319, gnl|Hg17|chr4 (148917443-148917148)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-319, gnl|bosTau2|chr17 (5560142-5559829)
               

               
               1-319, gnl|Hg17|chr4 (148917443-148917148)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cte (0.29274)
               

               
               nms (0.213858)
               

               
               nbm (0.0993246)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               nms (0.213858)
               

               
               nbm (0.0993246)

	1-319, gnl\|bosTau2\|chr17 (5560142-5559829)
	1-319, gnl\|Hg17\|chr4 (148917443-148917148)