Non-Coding RNA Search

Ss1.1-rcte09_h24.5

Sequence:


               
               AAATATGAAAATTCAACTGACAAGAGTAAATGTCCTTAAAGATAAAACAATTGAGAAGCT
CAGGCAATCTTTATCAAAACTTGAAGCAATGAAAGGGAAGAAAGTTATGGAAACAGACTT
GAAAATTACATTAGACTCTGCTGAGCAAGAGGCAAAATGGGACAAAGAGAGGGCCCATCA
GATGTTGGAAACCGTCACTCCTGAGCTCTGCACAGCAAAGAGCACACCTGAAGAAGCATC
AGGACAACAAGAGCTTGTTAACTTTCGAGAAACTATTATGAAGATGTTGGGATTTAACAT
GAAAACAGCAGACAAGAAAATCATTAATCACCTAAAGCTTATTATACAAGTATATGAAGA
ATCTGACAAATCAAAGATTGCTTCTGAGTGTGAGACTGGACAGGATAATGAATAAAGAAT
TTCTGCCAATAAGAACTCAGCGGATAGGGACATTTCCTCCAGCATGTTGAATATGGCTAC
ATTATTAATAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATATGAAAATTCAACTGACAAGAGTAAATGTCCTTAAAGATAAAACAATTGAGAAGCT
CAGGCAATCTTTATCAAAACTTGAAGCAATGAAAGGGAAGAAAGTTATGGAAACAGACTT
GAAAATTACATTAGACTCTGCTGAGCAAGAGGCAAAATGGGACAAAGAGAGGGCCCATCA
GATGTTGGAAACCGTCACTCCTGAGCTCTGCACAGCAAAGAGCACACCTGAAGAAGCATC
AGGACAACAAGAGCTTGTTAACTTTCGAGAAACTATTATGAAGATGTTGGGATTTAACAT
GAAAACAGCAGACAAGAAAATCATTAATCACCTAAAGCTTATTATACAAGTATATGAAGA
ATCTGACAAATCAAAGATTGCTTCTGAGTGTGAGACTGGACAGGATAATGAATAAAGAAT
TTCTGCCAATAAGAACTCAGCGGATAGGGACATTTCCTCCAGCATGTTGAATATGGCTAC
ATTATTAATAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61873056|ref|XP_607401.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61873056|ref|XP_607401.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               252-492, gnl|bosTau2|chr10 (51743810-51744049)
               

               
               252-492, gnl|Mm7|chr12 (74157022-74156778)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               252-492, gnl|bosTau2|chr10 (51743810-51744049)
               

               
               252-492, gnl|Mm7|chr12 (74157022-74156778)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (1.17096)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (1.17096)

	252-492, gnl\|bosTau2\|chr10 (51743810-51744049)
	252-492, gnl\|Mm7\|chr12 (74157022-74156778)