Ss1.1-rcte12_c22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGACATTGCTGCTTTTGAAAATGGAGGAGGTGACTGCCACGTTCCACAGAGGATCATATT TCTTGGAGTGGATGAAAAAGAAGTTTTGACTGAAGGGAAAGAAGTCACCATGTCAAAATG TTCAAATGCTAAAGATAACCAGGACAGTCCTCATCCAAAGAGTTCCCTAACTACCCGACT AGTACCTACAACGCATGTATTAAATGCTACTGAGAATATCAGTATGAAGTGCAGAGAGGA CCCCTCTTCAATGAATGATGTCCAGCCCGTGAGGAAGCCTCATTTTAAAGGTGTGAAAAA AAGAAAATGGATTTACGATGAACCAAAGAGCTTTCCTGGCCCAGGAATGCGGAGAGCAGT ACAGGCTCCAAATCCCAAAAATAAAATGAGTTACCACCGCAATCATAGAAACAGAAATTC CGAGAACGCAGCCTATATTCATGTTCAGAAAGATGCTGTCAAGACTGTCTCATGGAATGC ACCTCCCCGCGGCAGGCCCACAAACGGGTCCTACAATAGAGCTGATATCAACAAGGAACC CAAATTCAACCTCTGTTCAGATAAATATACGTCAACATCATATAATGGTTCAGCCTGGCG AAAAAGAATTCCTTTTTCAAAAACATATTCAAAAACTGAAAAGATATATACAGAGCCAAG AAGAAATGGGAGCAAGTAAACCTGGAGGTTGAGAGAAGAGAAAAATGAGAAAAGAGAAAA GTGCCAGAAATCATCTGATTTACAATCAAAAAAGAAAATTCAAAGAATGAGATATTCAAG TACTCCATACTATATACTGGATAGCCAAAGATGATAAAATGCAAATTCTGAAAATAAGAT GCAGGAAGTACATTGTGCTCTTTCAAAACTGATAAAAATGCAAATTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGACATTGCTGCTTTTGAAAATGGAGGAGGTGACTGCCACGTTCCACAGAGGATCATATT TCTTGGAGTGGATGAAAAAGAAGTTTTGACTGAAGGGAAAGAAGTCACCATGTCAAAATG TTCAAATGCTAAAGATAACCAGGACAGTCCTCATCCAAAGAGTTCCCTAACTACCCGACT AGTACCTACAACGCATGTATTAAATGCTACTGAGAATATCAGTATGAAGTGCAGAGAGGA CCCCTCTTCAATGAATGATGTCCAGCCCGTGAGGAAGCCTCATTTTAAAGGTGTGAAAAA AAGAAAATGGATTTACGATGAACCAAAGAGCTTTCCTGGCCCAGGAATGCGGAGAGCAGT ACAGGCTCCAAATCCCAAAAATAAAATGAGTTACCACCGCAATCATAGAAACAGAAATTC CGAGAACGCAGCCTATATTCATGTTCAGAAAGATGCTGTCAAGACTGTCTCATGGAATGC ACCTCCCCGCGGCAGGCCCACAAACGGGTCCTACAATAGAGCTGATATCAACAAGGAACC CAAATTCAACCTCTGTTCAGATAAATATACGTCAACATCATATAATGGTTCAGCCTGGCG AAAAAGAATTCCTTTTTCAAAAACATATTCAAAAACTGAAAAGATATATACAGAGCCAAG AAGAAATGGGAGCAAGTAAACCTGGAGGTTGAGAGAAGAGAAAAATGAGAAAAGAGAAAA GTGCCAGAAATCATCTGATTTACAATCAAAAAAGAAAATTCAAAGAATGAGATATTCAAG TACTCCATACTATATACTGGATAGCCAAAGATGATAAAATGCAAATTCTGAAAATAAGAT GCAGGAAGTACATTGTGCTCTTTCAAAACTGATAAAAATGCAAATTAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 131-251, gnl|bosTau2|chr10 (47242552-47242432) | |
| 131-251, gnl|canFam2|chr15 (32160392-32160942) | |
| 131-251, gnl|dasNov1|scaffold_22110 (2364-2898) | |
| 131-251, gnl|echTel1|scaffold_179675 (3408-3933) | |
| 131-251, gnl|hg17|chr12 (86883698-86884248) | |
| 131-251, gnl|Hg17|chr12 (86884215-86884095) | |
| 131-251, gnl|mm7|chr10 (100097715-100097207) | |
| 131-251, gnl|Mm7|chr10 (100097237-100097357) | |
| 131-251, gnl|monDom2|scaffold_36 (24301009-24301544) | |
| 131-251, gnl|oryCun1|scaffold_211701 (35236-35754) | |
| 131-251, gnl|panTro1|chr10 (89017288-89017838) | |
| 131-251, gnl|rheMac2|chr11 (89115729-89116279) | |
| 131-251, gnl|rn3|chr7 (38286228-38285732) | |
| 355-560, gnl|bosTau2|chr10 (47240714-47240509) | |
| 355-560, gnl|Hg17|chr12 (86882300-86882095) | |
| 355-560, gnl|Mm7|chr10 (100099390-100099595) | |
| 652-888, gnl|bosTau2|chr10 (47235241-47235005) | |
| 652-888, gnl|canFam2|chr15 (32153451-32153823) | |
| 652-888, gnl|dasNov1|scaffold_34851 (4161-4531) | |
| 652-888, gnl|echTel1|scaffold_293271 (5796-6172) | |
| 652-888, gnl|hg17|chr12 (86876269-86876637) | |
| 652-888, gnl|Hg17|chr12 (86876603-86876372) | |
| 652-888, gnl|loxAfr1|scaffold_13204 (14275-14572) | |
| 652-888, gnl|mm7|chr10 (100105056-100104684) | |
| 652-888, gnl|Mm7|chr10 (100104716-100104951) | |
| 652-888, gnl|monDom2|scaffold_36 (24286974-24287354) | |
| 652-888, gnl|oryCun1|scaffold_211701 (28532-28902) | |
| 652-888, gnl|panTro1|chr10 (89009764-89010132) | |
| 652-888, gnl|rheMac2|chr11 (89109247-89109613) | |
| 652-888, gnl|rn3|chr7 (38293553-38293179) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 131-251, gnl|bosTau2|chr10 (47242552-47242432) | |
| 131-251, gnl|canFam2|chr15 (32160392-32160942) | |
| 131-251, gnl|dasNov1|scaffold_22110 (2364-2898) | |
| 131-251, gnl|echTel1|scaffold_179675 (3408-3933) | |
| 131-251, gnl|hg17|chr12 (86883698-86884248) | |
| 131-251, gnl|Hg17|chr12 (86884215-86884095) | |
| 131-251, gnl|mm7|chr10 (100097715-100097207) | |
| 131-251, gnl|Mm7|chr10 (100097237-100097357) | |
| 131-251, gnl|monDom2|scaffold_36 (24301009-24301544) | |
| 131-251, gnl|oryCun1|scaffold_211701 (35236-35754) | |
| 131-251, gnl|panTro1|chr10 (89017288-89017838) | |
| 131-251, gnl|rheMac2|chr11 (89115729-89116279) | |
| 131-251, gnl|rn3|chr7 (38286228-38285732) | |
| 355-560, gnl|bosTau2|chr10 (47240714-47240509) | |
| 355-560, gnl|Hg17|chr12 (86882300-86882095) | |
| 355-560, gnl|Mm7|chr10 (100099390-100099595) | |
| 652-888, gnl|bosTau2|chr10 (47235241-47235005) | |
| 652-888, gnl|canFam2|chr15 (32153451-32153823) | |
| 652-888, gnl|dasNov1|scaffold_34851 (4161-4531) | |
| 652-888, gnl|echTel1|scaffold_293271 (5796-6172) | |
| 652-888, gnl|hg17|chr12 (86876269-86876637) | |
| 652-888, gnl|Hg17|chr12 (86876603-86876372) | |
| 652-888, gnl|loxAfr1|scaffold_13204 (14275-14572) | |
| 652-888, gnl|mm7|chr10 (100105056-100104684) | |
| 652-888, gnl|Mm7|chr10 (100104716-100104951) | |
| 652-888, gnl|monDom2|scaffold_36 (24286974-24287354) | |
| 652-888, gnl|oryCun1|scaffold_211701 (28532-28902) | |
| 652-888, gnl|panTro1|chr10 (89009764-89010132) | |
| 652-888, gnl|rheMac2|chr11 (89109247-89109613) | |
| 652-888, gnl|rn3|chr7 (38293553-38293179) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (5.8548) | |
| tes (1.03907) |