Non-Coding RNA Search

Ss1.1-rcte13_g7.5

Sequence:


               
               CTGAATCGCCTGAACGCTCACTCTATTTCACCCAGCGAAGCGCAGAAAATATTCAGCCAA
AACCTGAATGCATTGGGAGAAGCCGATGTGAGAGAAGATGATTCGCAGCCTCTTCTCACG
TGCAAGGTGGTGAGAAAGGACGAGAGGCCAGAATCTATGACCGAACTCCTTCACCGCAGC
TTACTGAGCAGCCCCCTCTATCCACTGGAGAGACTCAGCAGGTCCCAGCGGAGAATCTCT
CAGCATGGGATCCCCCCTCCCAGTTACACGTTTCCTTATGAGATTCTCATCAGTTCCTCC
ACAGGGAGCCCAGCAGCCGATGCCAAGAAGGAAGTTCAAGGCATCAGAATCTTATGCAGG
TTGGGCATTCCTGCAGTCTCACCGGAAAAGTTCATCTTTGAAGATAGGATTTCTAAATAC
GTATTAGTTGATCCAGAAAAACAATTCCTGGATCTAAGAGATCTGGAATGGAAATATTAC
AAGGGGATTGTGAAGTGGAAGCACATCTTTCCAGAATCATTTATAAACATAGAATACGAC
AGTGAGAAGAGATTTGTAGTGAGCCAGCAGATGCCTCGTGTTATTTCTCCCCCTCTGGTT
GATAAGTCTTTGGTCATTTATTCTCAGGTTAATTATCCAAAATAGTAACTTCTTAAATGG
AACATGACATTTATTAAAACATCTTGGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGAATCGCCTGAACGCTCACTCTATTTCACCCAGCGAAGCGCAGAAAATATTCAGCCAA
AACCTGAATGCATTGGGAGAAGCCGATGTGAGAGAAGATGATTCGCAGCCTCTTCTCACG
TGCAAGGTGGTGAGAAAGGACGAGAGGCCAGAATCTATGACCGAACTCCTTCACCGCAGC
TTACTGAGCAGCCCCCTCTATCCACTGGAGAGACTCAGCAGGTCCCAGCGGAGAATCTCT
CAGCATGGGATCCCCCCTCCCAGTTACACGTTTCCTTATGAGATTCTCATCAGTTCCTCC
ACAGGGAGCCCAGCAGCCGATGCCAAGAAGGAAGTTCAAGGCATCAGAATCTTATGCAGG
TTGGGCATTCCTGCAGTCTCACCGGAAAAGTTCATCTTTGAAGATAGGATTTCTAAATAC
GTATTAGTTGATCCAGAAAAACAATTCCTGGATCTAAGAGATCTGGAATGGAAATATTAC
AAGGGGATTGTGAAGTGGAAGCACATCTTTCCAGAATCATTTATAAACATAGAATACGAC
AGTGAGAAGAGATTTGTAGTGAGCCAGCAGATGCCTCGTGTTATTTCTCCCCCTCTGGTT
GATAAGTCTTTGGTCATTTATTCTCAGGTTAATTATCCAAAATAGTAACTTCTTAAATGG
AACATGACATTTATTAAAACATCTTGGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               2-436, gnl|bosTau2|chr8 (43058371-43057931)
               

               
               2-436, gnl|Hg17|chr9 (86072447-86072013)
               

               
               2-436, gnl|Mm7|chr13 (58799317-58798874)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-436, gnl|bosTau2|chr8 (43058371-43057931)
               

               
               2-436, gnl|Hg17|chr9 (86072447-86072013)
               

               
               2-436, gnl|Mm7|chr13 (58799317-58798874)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cte (0.29274)
               

               
               tes (0.207814)
               

               
               nbm (0.0993246)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               tes (0.207814)
               

               
               nbm (0.0993246)

	2-436, gnl\|bosTau2\|chr8 (43058371-43057931)
	2-436, gnl\|Hg17\|chr9 (86072447-86072013)
	2-436, gnl\|Mm7\|chr13 (58799317-58798874)