Ss1.1-rcte14_f17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGGATCTTCAGGAAGTGCTGACCAGATTCTATTACAAATTACCAAAGATATTCTCAATA AGCTACCAAACGATTTTGACATTGAATCAGCTCTACTCAAGTATCCCGTGAGATATGAAG AGAGCATGAATACTGTATTAGTACAAGAAATGGAAAGATTTAACAATTTAATTAAAACTA TACGCAACACTCTACGAGACCTTGAAAAAGCTATTAAGGGCGTTGTCGTAATGGACTCTG CATTGGAGGCACTCTCTGGAAGTCTGCTTGTTGGAAAGGTTCCAGAAATGTGGGCCCAAC GATCATACCCAAGTCTCAAACCCCTAGGAAGTTACATCACAGATTTTCTAGCCCGGTTGA ACTTTTTACAGGACTGGTATAATTCAAGAAAACCTTGTGTGTTTTGGCTCTCAAGTTTCT TTTTCACCCAAGCCTTTTTAACTGGAGCTATGCAGAATTATGCCAGAAAATATACCATCC CTATTGATGTACTAGGATATGAATTTGAGGTTATTCCTTCTGATACATCTGAGAAAGCAC CAGAAGATGGCGTTTATATCCACGGATTATATCTTGATGGAGCACGCTGGGACAGAATAA GCGGATTGCTTGCCCGAACAACACCCCAAACTTCTCTTTGACCTGATGCCAATCATATGG ATAAAACCAACTAAAAAGGCTCAGATTGTGAAGTCAAATGCTTATGTCTGTCCCCTTTAC AAGACAAGTGAACGTAAAGGAACTCTTTCGACCACAGGACATTCTACTAACTTTGTCATT GCAATGTTGTTAAAAACAGACCAACCTACTCAACACTGGATCAAACGTGGGGTTGCTTTG CTTTGTCAATTGGATGACTAAAATGGACGAATTAAGAAAATATCTGAAGGAAATTTTTTT TAAATCTTCACTTATTGAAAAAATATATATTATAAAACCCAAGTATCTTGATGTCTTTTT TTTTTTTGGCTGTATCTGTGGCGTGCAGAAGTTCCCCAGGCCAGAGACTGAACCCACACT GAACCTGTGCCACAGCAGAGACCCAAGCCACATCAGTGACAATCCACTGTGCCACAAGAG ATCTTGGTGTGATTCTTTTAAATGGTCTTTCCATTGCTCTCCATGATGAGAAAATAAATA AATAAATTAATTAATGTTTATTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGGATCTTCAGGAAGTGCTGACCAGATTCTATTACAAATTACCAAAGATATTCTCAATA AGCTACCAAACGATTTTGACATTGAATCAGCTCTACTCAAGTATCCCGTGAGATATGAAG AGAGCATGAATACTGTATTAGTACAAGAAATGGAAAGATTTAACAATTTAATTAAAACTA TACGCAACACTCTACGAGACCTTGAAAAAGCTATTAAGGGCGTTGTCGTAATGGACTCTG CATTGGAGGCACTCTCTGGAAGTCTGCTTGTTGGAAAGGTTCCAGAAATGTGGGCCCAAC GATCATACCCAAGTCTCAAACCCCTAGGAAGTTACATCACAGATTTTCTAGCCCGGTTGA ACTTTTTACAGGACTGGTATAATTCAAGAAAACCTTGTGTGTTTTGGCTCTCAAGTTTCT TTTTCACCCAAGCCTTTTTAACTGGAGCTATGCAGAATTATGCCAGAAAATATACCATCC CTATTGATGTACTAGGATATGAATTTGAGGTTATTCCTTCTGATACATCTGAGAAAGCAC CAGAAGATGGCGTTTATATCCACGGATTATATCTTGATGGAGCACGCTGGGACAGAATAA GCGGATTGCTTGCCCGAACAACACCCCAAACTTCTCTTTGACCTGATGCCAATCATATGG ATAAAACCAACTAAAAAGGCTCAGATTGTGAAGTCAAATGCTTATGTCTGTCCCCTTTAC AAGACAAGTGAACGTAAAGGAACTCTTTCGACCACAGGACATTCTACTAACTTTGTCATT GCAATGTTGTTAAAAACAGACCAACCTACTCAACACTGGATCAAACGTGGGGTTGCTTTG CTTTGTCAATTGGATGACTAAAATGGACGAATTAAGAAAATATCTGAAGGAAATTTTTTT TAAATCTTCACTTATTGAAAAAATATATATTATAAAACCCAAGTATCTTGATGTCTTTTT TTTTTTTGGCTGTATCTGTGGCGTGCAGAAGTTCCCCAGGCCAGAGACTGAACCCACACT GAACCTGTGCCACAGCAGAGACCCAAGCCACATCAGTGACAATCCACTGTGCCACAAGAG ATCTTGGTGTGATTCTTTTAAATGGTCTTTCCATTGCTCTCCATGATGAGAAAATAAATA AATAAATTAATTAATGTTTATTTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 168-372, gnl|bosTau2|chr22 (33202675-33202471) | |
| 168-372, gnl|canFam2|chr20 (36099707-36099517) | |
| 168-372, gnl|danRer3|chr23 (25708479-25708300) | |
| 168-372, gnl|dasNov1|scaffold_8500 (8313-8137) | |
| 168-372, gnl|echTel1|scaffold_317294 (67318-67508) | |
| 168-372, gnl|fr1|chrUn (176306327-176306151) | |
| 168-372, gnl|galGal2|chr12 (8713940-8714119) | |
| 168-372, gnl|hg17|chr3 (57310788-57310977) | |
| 168-372, gnl|Hg17|chr3 (57311006-57310802) | |
| 168-372, gnl|loxAfr1|scaffold_9513 (84532-84722) | |
| 168-372, gnl|mm7|chr14 (24317042-24316852) | |
| 168-372, gnl|Mm7|chr14 (24316821-24317025) | |
| 168-372, gnl|monDom2|scaffold_5 (2309104-2309293) | |
| 168-372, gnl|oryCun1|scaffold_206788 (175209-175393) | |
| 168-372, gnl|panTro1|chr2 (58979038-58979217) | |
| 168-372, gnl|rheMac2|chr2 (79068286-79068096) | |
| 168-372, gnl|rn3|chr16 (2147331-2147141) | |
| 168-372, gnl|tetNig1|chr9 (6039854-6039675) | |
| 168-372, gnl|xenTro1|scaffold_80 (2473137-2472960) | |
| 671-963, gnl|bosTau2|chr22 (33193255-33192959) | |
| 671-963, gnl|Hg17|chr3 (57303039-57302747) | |
| 671-963, gnl|Mm7|chr14 (24324211-24324492) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 168-372, gnl|bosTau2|chr22 (33202675-33202471) | |
| 168-372, gnl|canFam2|chr20 (36099707-36099517) | |
| 168-372, gnl|danRer3|chr23 (25708479-25708300) | |
| 168-372, gnl|dasNov1|scaffold_8500 (8313-8137) | |
| 168-372, gnl|echTel1|scaffold_317294 (67318-67508) | |
| 168-372, gnl|fr1|chrUn (176306327-176306151) | |
| 168-372, gnl|galGal2|chr12 (8713940-8714119) | |
| 168-372, gnl|hg17|chr3 (57310788-57310977) | |
| 168-372, gnl|Hg17|chr3 (57311006-57310802) | |
| 168-372, gnl|loxAfr1|scaffold_9513 (84532-84722) | |
| 168-372, gnl|mm7|chr14 (24317042-24316852) | |
| 168-372, gnl|Mm7|chr14 (24316821-24317025) | |
| 168-372, gnl|monDom2|scaffold_5 (2309104-2309293) | |
| 168-372, gnl|oryCun1|scaffold_206788 (175209-175393) | |
| 168-372, gnl|panTro1|chr2 (58979038-58979217) | |
| 168-372, gnl|rheMac2|chr2 (79068286-79068096) | |
| 168-372, gnl|rn3|chr16 (2147331-2147141) | |
| 168-372, gnl|tetNig1|chr9 (6039854-6039675) | |
| 168-372, gnl|xenTro1|scaffold_80 (2473137-2472960) | |
| 671-963, gnl|bosTau2|chr22 (33193255-33192959) | |
| 671-963, gnl|Hg17|chr3 (57303039-57302747) | |
| 671-963, gnl|Mm7|chr14 (24324211-24324492) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) |