Ss1.1-rcte15_l9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTCAGGAAGAAAGTAAGTCTGTGTGCCAGTCGTGCCGATCACCAGCACGTTTTTCTTCA GGTCGATGGAACATTGATGTCTCCTGAGCATATCTAGCCCTAGAAGCATGTCCATGGGCT GCTCCTCGAGTATAGAGAAAGAACATTGTAAGAAATCACCTTCGATTTGAATCTGAGCTA GGTGAACTCGGCCAATAATTCTCTGTGTACCCACACCTTTGGCAATCCCAGCCCATCTTC TGTCCACCAGCCGAATGATATTACATCTCTCAGCACAGGCTTGGCTCATAATGGTCATCT GGGCACCTGAGTCAACAAAAGCCTTCAAAGGATGTCCGTTCACTTTGCAGTTGATGTAGA GCATGGCCACTTGTCCGAAACTCTCAGGGGCCTCTTCCATAGCGATATTCATGTTTTCCT CAATGTTCTGCTGCCGGATCTCTTCCTCTATTTTGGCCTGAGCTTCCAAATCAAATGGGT CAGCCGAGTAGAGGCGAAATCTCTCTTGCTCCCTCAGGACCCTTTCCCTTTGCTGCTCCA TCAGGACCTGGGAAAAGGTCTCTAGGTTTCCACTGAGCAGGGCTTCAGCCAAGGCGGGGT TGCGTTCCTTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTCAGGAAGAAAGTAAGTCTGTGTGCCAGTCGTGCCGATCACCAGCACGTTTTTCTTCA GGTCGATGGAACATTGATGTCTCCTGAGCATATCTAGCCCTAGAAGCATGTCCATGGGCT GCTCCTCGAGTATAGAGAAAGAACATTGTAAGAAATCACCTTCGATTTGAATCTGAGCTA GGTGAACTCGGCCAATAATTCTCTGTGTACCCACACCTTTGGCAATCCCAGCCCATCTTC TGTCCACCAGCCGAATGATATTACATCTCTCAGCACAGGCTTGGCTCATAATGGTCATCT GGGCACCTGAGTCAACAAAAGCCTTCAAAGGATGTCCGTTCACTTTGCAGTTGATGTAGA GCATGGCCACTTGTCCGAAACTCTCAGGGGCCTCTTCCATAGCGATATTCATGTTTTCCT CAATGTTCTGCTGCCGGATCTCTTCCTCTATTTTGGCCTGAGCTTCCAAATCAAATGGGT CAGCCGAGTAGAGGCGAAATCTCTCTTGCTCCCTCAGGACCCTTTCCCTTTGCTGCTCCA TCAGGACCTGGGAAAAGGTCTCTAGGTTTCCACTGAGCAGGGCTTCAGCCAAGGCGGGGT TGCGTTCCTTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 75-180, gnl|bosTau2|chr16 (38904110-38904005) | |
| 75-180, gnl|canFam2|chr2 (84829768-84829641) | |
| 75-180, gnl|danRer3|chr22 (35317948-35318067) | |
| 75-180, gnl|dasNov1|scaffold_33844 (36246-36116) | |
| 75-180, gnl|echTel1|scaffold_204356 (14535-14405) | |
| 75-180, gnl|fr1|chrUn (102521635-102521755) | |
| 75-180, gnl|galGal2|chrUn (86328417-86328294) | |
| 75-180, gnl|hg17|chr1 (15721504-15721633) | |
| 75-180, gnl|Hg17|chr1 (15721623-15721516) | |
| 75-180, gnl|loxAfr1|scaffold_15285 (12932-12802) | |
| 75-180, gnl|mm7|chr4 (141073966-141073841) | |
| 75-180, gnl|Mm7|chr4 (141073849-141073954) | |
| 75-180, gnl|monDom2|scaffold_109 (3611492-3611372) | |
| 75-180, gnl|oryCun1|scaffold_145194 (15473-15598) | |
| 75-180, gnl|panTro1|chr1 (15878532-15878661) | |
| 75-180, gnl|rheMac2|chr1 (18432765-18432894) | |
| 75-180, gnl|rn3|chr5 (160603308-160603183) | |
| 75-180, gnl|tetNig1|chr11 (4604168-4604048) | |
| 75-180, gnl|xenTro1|scaffold_1056 (270022-269899) | |
| 302-435, gnl|bosTau2|chr16 (38893112-38892979) | |
| 302-435, gnl|canFam2|chr2 (84839564-84839405) | |
| 302-435, gnl|danRer3|chr22 (35316819-35316954) | |
| 302-435, gnl|dasNov1|scaffold_42 (121942-121817) | |
| 302-435, gnl|echTel1|scaffold_294646 (851-704) | |
| 302-435, gnl|fr1|chrUn (102520996-102521152) | |
| 302-435, gnl|galGal2|chrUn (86329934-86329778) | |
| 302-435, gnl|hg17|chr1 (15710105-15710265) | |
| 302-435, gnl|Hg17|chr1 (15710240-15710107) | |
| 302-435, gnl|loxAfr1|scaffold_15285 (19652-19492) | |
| 302-435, gnl|mm7|chr4 (141081685-141081541) | |
| 302-435, gnl|Mm7|chr4 (141081550-141081681) | |
| 302-435, gnl|monDom2|scaffold_109 (3616338-3616182) | |
| 302-435, gnl|oryCun1|scaffold_145194 (8068-8227) | |
| 302-435, gnl|panTro1|chr1 (15867082-15867242) | |
| 302-435, gnl|rheMac2|chr1 (18421369-18421529) | |
| 302-435, gnl|rn3|chr5 (160611117-160610974) | |
| 302-435, gnl|tetNig1|chr11 (4604743-4604609) | |
| 302-435, gnl|xenTro1|scaffold_1056 (271138-271003) | |
| 438-563, gnl|bosTau2|chr16 (38889290-38889165) | |
| 438-563, gnl|Hg17|chr1 (15705363-15705238) | |
| 438-563, gnl|Mm7|chr4 (141084376-141084501) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 75-180, gnl|bosTau2|chr16 (38904110-38904005) | |
| 75-180, gnl|canFam2|chr2 (84829768-84829641) | |
| 75-180, gnl|danRer3|chr22 (35317948-35318067) | |
| 75-180, gnl|dasNov1|scaffold_33844 (36246-36116) | |
| 75-180, gnl|echTel1|scaffold_204356 (14535-14405) | |
| 75-180, gnl|fr1|chrUn (102521635-102521755) | |
| 75-180, gnl|galGal2|chrUn (86328417-86328294) | |
| 75-180, gnl|hg17|chr1 (15721504-15721633) | |
| 75-180, gnl|Hg17|chr1 (15721623-15721516) | |
| 75-180, gnl|loxAfr1|scaffold_15285 (12932-12802) | |
| 75-180, gnl|mm7|chr4 (141073966-141073841) | |
| 75-180, gnl|Mm7|chr4 (141073849-141073954) | |
| 75-180, gnl|monDom2|scaffold_109 (3611492-3611372) | |
| 75-180, gnl|oryCun1|scaffold_145194 (15473-15598) | |
| 75-180, gnl|panTro1|chr1 (15878532-15878661) | |
| 75-180, gnl|rheMac2|chr1 (18432765-18432894) | |
| 75-180, gnl|rn3|chr5 (160603308-160603183) | |
| 75-180, gnl|tetNig1|chr11 (4604168-4604048) | |
| 75-180, gnl|xenTro1|scaffold_1056 (270022-269899) | |
| 302-435, gnl|bosTau2|chr16 (38893112-38892979) | |
| 302-435, gnl|canFam2|chr2 (84839564-84839405) | |
| 302-435, gnl|danRer3|chr22 (35316819-35316954) | |
| 302-435, gnl|dasNov1|scaffold_42 (121942-121817) | |
| 302-435, gnl|echTel1|scaffold_294646 (851-704) | |
| 302-435, gnl|fr1|chrUn (102520996-102521152) | |
| 302-435, gnl|galGal2|chrUn (86329934-86329778) | |
| 302-435, gnl|hg17|chr1 (15710105-15710265) | |
| 302-435, gnl|Hg17|chr1 (15710240-15710107) | |
| 302-435, gnl|loxAfr1|scaffold_15285 (19652-19492) | |
| 302-435, gnl|mm7|chr4 (141081685-141081541) | |
| 302-435, gnl|Mm7|chr4 (141081550-141081681) | |
| 302-435, gnl|monDom2|scaffold_109 (3616338-3616182) | |
| 302-435, gnl|oryCun1|scaffold_145194 (8068-8227) | |
| 302-435, gnl|panTro1|chr1 (15867082-15867242) | |
| 302-435, gnl|rheMac2|chr1 (18421369-18421529) | |
| 302-435, gnl|rn3|chr5 (160611117-160610974) | |
| 302-435, gnl|tetNig1|chr11 (4604743-4604609) | |
| 302-435, gnl|xenTro1|scaffold_1056 (271138-271003) | |
| 438-563, gnl|bosTau2|chr16 (38889290-38889165) | |
| 438-563, gnl|Hg17|chr1 (15705363-15705238) | |
| 438-563, gnl|Mm7|chr4 (141084376-141084501) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.58548) |