Non-Coding RNA Search

Ss1.1-rcte19_m3.5

Sequence:


               
               AAATTGAACAGATTAAATTTGATAAATATATTCTGAGAAAACAGCCAGGTGTTCATTATA
TAAATAACACTTCTTCAGATTCTAGACACTCAGAGGAAAGTGAGCTGCTCACAGATACTC
CCATTCTTTCCACCACCACTTCTCCTGTGGAATCTGATATATTGGCCCAAACAGATAAGG
AAGTGACTTTGCATGACGGAAGTAGCTCTATTTCCACCATTGACACTGCTCGATTGATCC
ATGCTTTTGGCCATGAAAGAGTTTGTCTGTCACCCAGACGAATTAAATTATACAGCAGCA
TCACTGACCATCAAAGGCGGTACCTTGAGAAGCGGAGCAAGAAAAACAAGAAAGCATTGA
ATACAGGTTATCCCCAAATTACTTCAGAACACACCAGAAGGAAACACATCCAGGTACATG
GCTACAAATTGCATCTGGCAATGTGACTGCCTTTTTCATGGACTTTTCAAGTTTGCACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATTGAACAGATTAAATTTGATAAATATATTCTGAGAAAACAGCCAGGTGTTCATTATA
TAAATAACACTTCTTCAGATTCTAGACACTCAGAGGAAAGTGAGCTGCTCACAGATACTC
CCATTCTTTCCACCACCACTTCTCCTGTGGAATCTGATATATTGGCCCAAACAGATAAGG
AAGTGACTTTGCATGACGGAAGTAGCTCTATTTCCACCATTGACACTGCTCGATTGATCC
ATGCTTTTGGCCATGAAAGAGTTTGTCTGTCACCCAGACGAATTAAATTATACAGCAGCA
TCACTGACCATCAAAGGCGGTACCTTGAGAAGCGGAGCAAGAAAAACAAGAAAGCATTGA
ATACAGGTTATCCCCAAATTACTTCAGAACACACCAGAAGGAAACACATCCAGGTACATG
GCTACAAATTGCATCTGGCAATGTGACTGCCTTTTTCATGGACTTTTCAAGTTTGCACAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-473, gnl|bosTau2|chr11 (9290024-9290502)
               

               
               1-473, gnl|Hg17|chr2 (73711788-73712265)
               

               
               1-473, gnl|Mm7|chr6 (85854824-85855299)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-473, gnl|bosTau2|chr11 (9290024-9290502)
               

               
               1-473, gnl|Hg17|chr2 (73711788-73712265)
               

               
               1-473, gnl|Mm7|chr6 (85854824-85855299)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cte (1.17096)
               

               
               tes (0.207814)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (1.17096)
               

               
               tes (0.207814)

	1-473, gnl\|bosTau2\|chr11 (9290024-9290502)
	1-473, gnl\|Hg17\|chr2 (73711788-73712265)
	1-473, gnl\|Mm7\|chr6 (85854824-85855299)