Ss1.1-rcte26_i15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATATGGCAGCGGCGGTAGCAGTGGCAACGGCAGCAGGAGGACCGACCGCTTCATAGATT TCCCCCCCACCCCCACCCCGCGCACCACCGCCGCCGCTTCCTCTGCTTGGGTGCTCCTCT GGCCTGACTTCCCCCTTCTCCCACCTTTCCCGGCACCGCGGGAAAAACAGCGCAGGGCAG AGCAGGCAGGGAGGGCGGCTGGAGCCCGGACACGGGAGCCTCCCAGTCAGTTCAAGACCC GACATGAGGGAAAAGGGCCGTAGGAAGAAGGGCAGGACCTGGGCGGAGGCCGCCAAGACG GTCTTAGAAAAATATCCCAATACACCCATGAGTCATAAAGAAATTCTTCAAGTTATCCAG AGAGAAGGACTCAAAGAAATCGGAAGTGGCACTTCCCCTCTTGCATGCCTAAATGCAATG CTGCACACAAACTCCCGAGGTGAAGAGGGCATCTTCTATAAAGTTCCAGGTAGAATGGGA GTATATACTTTGAAGAAAGATGTGCCGGATGGGGTGAAAGAGCTATCAGAAGGTTCAGAA GAAAGCAGTGATGGTCAGTCAGATTCCCAGAGTTCTGAGAACAGCAGCAGCAGCAGTGAT GGTGGCAGCAACAAGGAGGGAAAAAAGAGCAGGTGGAAAAGGAAAGTATCGTCTAGACTG TCACAGCCGTCTTCTCCCCAGTCAGGGTGCCCATCACCCACCATTCCAGCAGGTAAAGTC ATTTCTCCGTCACAGAAGCACAGCAAGAAGGCACTAAAGCAGGCTCTAAAACAGCAGCAA CAGAAAAAGCAGCAGCAGCAGCAATGCAGGCCAAGCATGTCCATCTCCTCCAACCAGCAC CTCTCTCTGAAGACTGTCAAAGCAGCCAGTGACTCCATACCGGCCCAGCCTGCAATATGG GAAGGAAAGCAGTCTGACGGACAGTCAAGCAGCCCTCAGAACTCAAACTCTAGCTTTTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATATGGCAGCGGCGGTAGCAGTGGCAACGGCAGCAGGAGGACCGACCGCTTCATAGATT TCCCCCCCACCCCCACCCCGCGCACCACCGCCGCCGCTTCCTCTGCTTGGGTGCTCCTCT GGCCTGACTTCCCCCTTCTCCCACCTTTCCCGGCACCGCGGGAAAAACAGCGCAGGGCAG AGCAGGCAGGGAGGGCGGCTGGAGCCCGGACACGGGAGCCTCCCAGTCAGTTCAAGACCC GACATGAGGGAAAAGGGCCGTAGGAAGAAGGGCAGGACCTGGGCGGAGGCCGCCAAGACG GTCTTAGAAAAATATCCCAATACACCCATGAGTCATAAAGAAATTCTTCAAGTTATCCAG AGAGAAGGACTCAAAGAAATCGGAAGTGGCACTTCCCCTCTTGCATGCCTAAATGCAATG CTGCACACAAACTCCCGAGGTGAAGAGGGCATCTTCTATAAAGTTCCAGGTAGAATGGGA GTATATACTTTGAAGAAAGATGTGCCGGATGGGGTGAAAGAGCTATCAGAAGGTTCAGAA GAAAGCAGTGATGGTCAGTCAGATTCCCAGAGTTCTGAGAACAGCAGCAGCAGCAGTGAT GGTGGCAGCAACAAGGAGGGAAAAAAGAGCAGGTGGAAAAGGAAAGTATCGTCTAGACTG TCACAGCCGTCTTCTCCCCAGTCAGGGTGCCCATCACCCACCATTCCAGCAGGTAAAGTC ATTTCTCCGTCACAGAAGCACAGCAAGAAGGCACTAAAGCAGGCTCTAAAACAGCAGCAA CAGAAAAAGCAGCAGCAGCAGCAATGCAGGCCAAGCATGTCCATCTCCTCCAACCAGCAC CTCTCTCTGAAGACTGTCAAAGCAGCCAGTGACTCCATACCGGCCCAGCCTGCAATATGG GAAGGAAAGCAGTCTGACGGACAGTCAAGCAGCCCTCAGAACTCAAACTCTAGCTTTTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-302, gnl|bosTau2|chr11 (54479658-54479369) | |
| 1-302, gnl|Hg17|chr2 (26012971-26012684) | |
| 1-302, gnl|Mm7|chr12 (3345391-3345685) | |
| 489-646, gnl|bosTau2|chr11 (54408322-54408165) | |
| 489-646, gnl|Hg17|chr2 (25934062-25933905) | |
| 489-646, gnl|Mm7|chr12 (3375526-3375680) | |
| 761-892, gnl|bosTau2|chr11 (54397823-54397692) | |
| 761-892, gnl|canFam2|chr17 (22928930-22929047) | |
| 761-892, gnl|dasNov1|scaffold_14668 (41860-41750) | |
| 761-892, gnl|echTel1|scaffold_271129 (11009-10892) | |
| 761-892, gnl|galGal2|chr3 (102847172-102847285) | |
| 761-892, gnl|hg17|chr2 (25903239-25903352) | |
| 761-892, gnl|Hg17|chr2 (25903390-25903262) | |
| 761-892, gnl|loxAfr1|scaffold_6058 (5098-5211) | |
| 761-892, gnl|mm7|chr12 (3393114-3392999) | |
| 761-892, gnl|Mm7|chr12 (3392959-3393084) | |
| 761-892, gnl|monDom2|scaffold_1 (151073107-151072979) | |
| 761-892, gnl|oryCun1|scaffold_49560 (4-118) | |
| 761-892, gnl|panTro1|chr12 (26807188-26807301) | |
| 761-892, gnl|rheMac2|chr13 (25708745-25708858) | |
| 761-892, gnl|rn3|chr6 (26457913-26457787) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-302, gnl|bosTau2|chr11 (54479658-54479369) | |
| 1-302, gnl|Hg17|chr2 (26012971-26012684) | |
| 1-302, gnl|Mm7|chr12 (3345391-3345685) | |
| 489-646, gnl|bosTau2|chr11 (54408322-54408165) | |
| 489-646, gnl|Hg17|chr2 (25934062-25933905) | |
| 489-646, gnl|Mm7|chr12 (3375526-3375680) | |
| 761-892, gnl|bosTau2|chr11 (54397823-54397692) | |
| 761-892, gnl|canFam2|chr17 (22928930-22929047) | |
| 761-892, gnl|dasNov1|scaffold_14668 (41860-41750) | |
| 761-892, gnl|echTel1|scaffold_271129 (11009-10892) | |
| 761-892, gnl|galGal2|chr3 (102847172-102847285) | |
| 761-892, gnl|hg17|chr2 (25903239-25903352) | |
| 761-892, gnl|Hg17|chr2 (25903390-25903262) | |
| 761-892, gnl|loxAfr1|scaffold_6058 (5098-5211) | |
| 761-892, gnl|mm7|chr12 (3393114-3392999) | |
| 761-892, gnl|Mm7|chr12 (3392959-3393084) | |
| 761-892, gnl|monDom2|scaffold_1 (151073107-151072979) | |
| 761-892, gnl|oryCun1|scaffold_49560 (4-118) | |
| 761-892, gnl|panTro1|chr12 (26807188-26807301) | |
| 761-892, gnl|rheMac2|chr13 (25708745-25708858) | |
| 761-892, gnl|rn3|chr6 (26457913-26457787) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) |