Ss1.1-rcte29_h20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGGAATGCCTTAGAAGAGGTTCAGCTTAAAGAAGCCGTTGAAGGTCTCCCTGGGAGACT GAATACTGAATTAGCAGAATCTGGATCGAACTTGAGTGCTGGACAGAGACAGCTGGTGTC CTTTGCCAGGGCTATTCTCAGGAAAAATCAGATATTGATTATTGACAAAGCCACATCTAA TGTGGATCCAAGAACTGATGAGTTAATTAAGAAAAAAGTCCGTGAGAAATTTGCCCAGTC CATTGTGTTAACCATCACAAACAGGTTGAGAACTGTTATTGACAGCGAATCTGTAATGGT TTTGGATTCAGGAAGACGGGTAGAATTCAGTCGGCCGTATAAGTTGCTGCAAAATAGAAA CAGCCTATTTTACAAGATGGTGCAACACCTGGGGGAGGCCGAGGCCGCTGCCCTCACTGA GACAGCAACACAGGTGCACATGGAAAGGAAATAGCCAGAAATCACTCACAACGGCCACAC GGTTCTGAACGTTTCCAGTGGACGGGCCTCCGCCTGAACAGTGTGGGGGCAGCACTGTGA TCCTGCCGTGAGGGCAGGTGTGCTCCAGAGGCATTTCTCCAAGTTTTTGCATTGCATAAA CTGTATTTTACTTTTTTTAATACCAGCAACAAATATTTACACATACAGGATGTTAGTTTA TTTATTTTTTTTCTTACACCTTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGGAATGCCTTAGAAGAGGTTCAGCTTAAAGAAGCCGTTGAAGGTCTCCCTGGGAGACT GAATACTGAATTAGCAGAATCTGGATCGAACTTGAGTGCTGGACAGAGACAGCTGGTGTC CTTTGCCAGGGCTATTCTCAGGAAAAATCAGATATTGATTATTGACAAAGCCACATCTAA TGTGGATCCAAGAACTGATGAGTTAATTAAGAAAAAAGTCCGTGAGAAATTTGCCCAGTC CATTGTGTTAACCATCACAAACAGGTTGAGAACTGTTATTGACAGCGAATCTGTAATGGT TTTGGATTCAGGAAGACGGGTAGAATTCAGTCGGCCGTATAAGTTGCTGCAAAATAGAAA CAGCCTATTTTACAAGATGGTGCAACACCTGGGGGAGGCCGAGGCCGCTGCCCTCACTGA GACAGCAACACAGGTGCACATGGAAAGGAAATAGCCAGAAATCACTCACAACGGCCACAC GGTTCTGAACGTTTCCAGTGGACGGGCCTCCGCCTGAACAGTGTGGGGGCAGCACTGTGA TCCTGCCGTGAGGGCAGGTGTGCTCCAGAGGCATTTCTCCAAGTTTTTGCATTGCATAAA CTGTATTTTACTTTTTTTAATACCAGCAACAAATATTTACACATACAGGATGTTAGTTTA TTTATTTTTTTTCTTACACCTTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 18-192, gnl|bosTau2|chr12 (37211235-37211061) | |
| 18-192, gnl|canFam2|chr22 (48735353-48735556) | |
| 18-192, gnl|danRer3|chr6 (2205656-2205848) | |
| 18-192, gnl|dasNov1|scaffold_481 (78298-78095) | |
| 18-192, gnl|echTel1|scaffold_305508 (2466-2264) | |
| 18-192, gnl|fr1|chrUn (95647695-95647499) | |
| 18-192, gnl|galGal2|chr1 (138865445-138865236) | |
| 18-192, gnl|hg17|chr13 (94494516-94494719) | |
| 18-192, gnl|Hg17|chr13 (94494695-94494521) | |
| 18-192, gnl|loxAfr1|scaffold_4510 (78553-78755) | |
| 18-192, gnl|mm7|chr14 (112902961-112903164) | |
| 18-192, gnl|Mm7|chr14 (112903140-112902966) | |
| 18-192, gnl|monDom2|scaffold_11 (58255882-58255676) | |
| 18-192, gnl|oryCun1|scaffold_97146 (12005-11803) | |
| 18-192, gnl|panTro1|chr14 (77527567-77527770) | |
| 18-192, gnl|rheMac2|chr17 (75439239-75439442) | |
| 18-192, gnl|rn3|chr15 (103416864-103417067) | |
| 18-192, gnl|tetNig1|chr2 (10673826-10674022) | |
| 18-192, gnl|xenTro1|scaffold_486 (832742-832922) | |
| 431-684, gnl|bosTau2|chr12 (37199442-37199184) | |
| 431-684, gnl|Hg17|chr13 (94471940-94471686) | |
| 431-684, gnl|Mm7|chr14 (112886690-112886421) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 18-192, gnl|bosTau2|chr12 (37211235-37211061) | |
| 18-192, gnl|canFam2|chr22 (48735353-48735556) | |
| 18-192, gnl|danRer3|chr6 (2205656-2205848) | |
| 18-192, gnl|dasNov1|scaffold_481 (78298-78095) | |
| 18-192, gnl|echTel1|scaffold_305508 (2466-2264) | |
| 18-192, gnl|fr1|chrUn (95647695-95647499) | |
| 18-192, gnl|galGal2|chr1 (138865445-138865236) | |
| 18-192, gnl|hg17|chr13 (94494516-94494719) | |
| 18-192, gnl|Hg17|chr13 (94494695-94494521) | |
| 18-192, gnl|loxAfr1|scaffold_4510 (78553-78755) | |
| 18-192, gnl|mm7|chr14 (112902961-112903164) | |
| 18-192, gnl|Mm7|chr14 (112903140-112902966) | |
| 18-192, gnl|monDom2|scaffold_11 (58255882-58255676) | |
| 18-192, gnl|oryCun1|scaffold_97146 (12005-11803) | |
| 18-192, gnl|panTro1|chr14 (77527567-77527770) | |
| 18-192, gnl|rheMac2|chr17 (75439239-75439442) | |
| 18-192, gnl|rn3|chr15 (103416864-103417067) | |
| 18-192, gnl|tetNig1|chr2 (10673826-10674022) | |
| 18-192, gnl|xenTro1|scaffold_486 (832742-832922) | |
| 431-684, gnl|bosTau2|chr12 (37199442-37199184) | |
| 431-684, gnl|Hg17|chr13 (94471940-94471686) | |
| 431-684, gnl|Mm7|chr14 (112886690-112886421) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) | |
| ese (0.126502) | |
| eje (0.0988338) |