Non-Coding RNA Search

Ss1.1-rcte35_p12.5

Sequence:


               
               GTCAAGGACTCGGTGAATTACAGAGCCAGGAGGACTGTAAAGCCAAGGCAGTGGACGAGG
GGAGACGACGGACCAAGAAGGAAGACATCAGGCCTAGGACCCGAGAGGAGAAGAGGCCAA
GCTCGAAGCCCAGGGAAGAGAAGAAGCAGGACCCAGAGAAGCCGGTAAAACGGACCATCC
AGAAGTCATCCTCAGTTAAAACTGACCGGACCTCGAATGTGCAGGGGAAGAGCCATGACT
CAAGGCCAGCTCGCACAAAGAATTCCATTAAATCTGAAGGGCCTCGGAATGCAGCCGGGA
ATCCATAGTGTGGGAGCAACTTCCCTTCCTCCAGGCACAGATGCCTTTCCCCAGAGGCCC
CATTGAGAGCAGTGCCACACTCATTGAAATGGAAAAGCTATTCACAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCAAGGACTCGGTGAATTACAGAGCCAGGAGGACTGTAAAGCCAAGGCAGTGGACGAGG
GGAGACGACGGACCAAGAAGGAAGACATCAGGCCTAGGACCCGAGAGGAGAAGAGGCCAA
GCTCGAAGCCCAGGGAAGAGAAGAAGCAGGACCCAGAGAAGCCGGTAAAACGGACCATCC
AGAAGTCATCCTCAGTTAAAACTGACCGGACCTCGAATGTGCAGGGGAAGAGCCATGACT
CAAGGCCAGCTCGCACAAAGAATTCCATTAAATCTGAAGGGCCTCGGAATGCAGCCGGGA
ATCCATAGTGTGGGAGCAACTTCCCTTCCTCCAGGCACAGATGCCTTTCCCCAGAGGCCC
CATTGAGAGCAGTGCCACACTCATTGAAATGGAAAAGCTATTCACAAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               224-408, gnl|bosTau2|chr11 (45882892-45882704)
               

               
               224-408, gnl|Hg17|chr12 (47010118-47010328)
               

               
               224-408, gnl|Mm7|chr15 (98238750-98238578)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               224-408, gnl|bosTau2|chr11 (45882892-45882704)
               

               
               224-408, gnl|Hg17|chr12 (47010118-47010328)
               

               
               224-408, gnl|Mm7|chr15 (98238750-98238578)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (0.58548)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.58548)

	224-408, gnl\|bosTau2\|chr11 (45882892-45882704)
	224-408, gnl\|Hg17\|chr12 (47010118-47010328)
	224-408, gnl\|Mm7\|chr15 (98238750-98238578)