Non-Coding RNA Search

Ss1.1-rcut06_m7.5

Sequence:


               
               GTGGTAGATGATAAGGGAGGCAGCTATGTTAGAGAAAGAACATGGGCTTTGGAAGGATAA
CTAAGTTCCAGTCATGACTCAGCTATTTTCTGACAGCAAGTCGCTTAACTGCTCCGAAAC
TTGCCCTAAGGGTTAGAAGTAGTTAGAAGGGTTAGTAGTTAGTAAAGAGCCCAGGGGATA
ATAGACACTCAAATAGTAGCTATATTATTGATATTTTAAGCGGTTCTGATTTCTAAGGTT
GTCTTTAAATATTGGTATTGTAGTTTTAAATCTGTACATATCTTTTCAAGTTTAATTGCA
AATTGAAGGTTCCAAGTGACGTTCTTTATTTTAACAGCTGCTTGGTCTAGTGTGGATAGG
GGAATGAATACCTCTGAACAGAATTCTGCTTCTTTTGCATCTCTCACACTTAACTCTGCT
GGTTCTGGGTCTACTGCTGAGCCAGTTTCTCAGTCTACTACTTCTGATTATCAGTGGGAT
GCTAGCGGTAATCAACCCTATATCGATGATGAATGGTCTGGGTTAAATGGTCTGTCTTCT
GCTGATCCCAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGTAGATGATAAGGGAGGCAGCTATGTTAGAGAAAGAACATGGGCTTTGGAAGGATAA
CTAAGTTCCAGTCATGACTCAGCTATTTTCTGACAGCAAGTCGCTTAACTGCTCCGAAAC
TTGCCCTAAGGGTTAGAAGTAGTTAGAAGGGTTAGTAGTTAGTAAAGAGCCCAGGGGATA
ATAGACACTCAAATAGTAGCTATATTATTGATATTTTAAGCGGTTCTGATTTCTAAGGTT
GTCTTTAAATATTGGTATTGTAGTTTTAAATCTGTACATATCTTTTCAAGTTTAATTGCA
AATTGAAGGTTCCAAGTGACGTTCTTTATTTTAACAGCTGCTTGGTCTAGTGTGGATAGG
GGAATGAATACCTCTGAACAGAATTCTGCTTCTTTTGCATCTCTCACACTTAACTCTGCT
GGTTCTGGGTCTACTGCTGAGCCAGTTTCTCAGTCTACTACTTCTGATTATCAGTGGGAT
GCTAGCGGTAATCAACCCTATATCGATGATGAATGGTCTGGGTTAAATGGTCTGTCTTCT
GCTGATCCCAGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-428, gnl|bosTau2|chr14 (40095505-40095106)
               

               
               23-428, gnl|Hg17|chr8 (98777298-98777698)
               

               
               23-428, gnl|Mm7|chr15 (34230078-34230463)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-428, gnl|bosTau2|chr14 (40095505-40095106)
               

               
               23-428, gnl|Hg17|chr8 (98777298-98777698)
               

               
               23-428, gnl|Mm7|chr15 (34230078-34230463)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cut (0.169924)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	23-428, gnl\|bosTau2\|chr14 (40095505-40095106)
	23-428, gnl\|Hg17\|chr8 (98777298-98777698)
	23-428, gnl\|Mm7\|chr15 (34230078-34230463)