Non-Coding RNA Search

Ss1.1-rcut20_k7.5

Sequence:


               
               CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CCGCCCCCCATGTTTAATGGAATTTGTGATAGATTGTATTTTCCAAGATGGCCACACCTC
CCATCCCACATACTCTTCTTACAATGTGGTCATGACCTTCTCGTGTGAGAGGTGGGTCTC
TGTTCTCTCCTCTTGAACCTGTGCAGGCCTGTGACCACAGTGGAAGTGATAACTGTGTGA
TTTCCATAGATCGTGTAAGATAAAAGGTGATACAGTTTCCACCTAGTTCTCTTGAGATGC
TCCTTGGAAACCAGCCTGTGGAGAGACTCATATGGACAGGAGGCCTGGCTGAGCTCCAGA
CAGCAGTCATCAGTGATAGGAGTGGTCATCTTGGAAGCGGTCCTCCAGTTGAGCTATCAC
AGCTGATGCTGTATGGAACAGAGACAAGCCTCTGTTGAGCCCTGCCAGAATTGTAGATTT
CAGCTAAATAAATGATTGTTGTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CCGCCCCCCATGTTTAATGGAATTTGTGATAGATTGTATTTTCCAAGATGGCCACACCTC
CCATCCCACATACTCTTCTTACAATGTGGTCATGACCTTCTCGTGTGAGAGGTGGGTCTC
TGTTCTCTCCTCTTGAACCTGTGCAGGCCTGTGACCACAGTGGAAGTGATAACTGTGTGA
TTTCCATAGATCGTGTAAGATAAAAGGTGATACAGTTTCCACCTAGTTCTCTTGAGATGC
TCCTTGGAAACCAGCCTGTGGAGAGACTCATATGGACAGGAGGCCTGGCTGAGCTCCAGA
CAGCAGTCATCAGTGATAGGAGTGGTCATCTTGGAAGCGGTCCTCCAGTTGAGCTATCAC
AGCTGATGCTGTATGGAACAGAGACAAGCCTCTGTTGAGCCCTGCCAGAATTGTAGATTT
CAGCTAAATAAATGATTGTTGTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               67-503, gnl|bosTau2|chr16 (41748188-41747733)
               

               
               67-503, gnl|Hg17|chr1 (170307323-170306836)
               

               
               67-503, gnl|Mm7|chr1 (161134578-161135031)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-503, gnl|bosTau2|chr16 (41748188-41747733)
               

               
               67-503, gnl|Hg17|chr1 (170307323-170306836)
               

               
               67-503, gnl|Mm7|chr1 (161134578-161135031)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fce (0.271592)
               

               
               cut (0.169924)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               cut (0.169924)

	67-503, gnl\|bosTau2\|chr16 (41748188-41747733)
	67-503, gnl\|Hg17\|chr1 (170307323-170306836)
	67-503, gnl\|Mm7\|chr1 (161134578-161135031)