Non-Coding RNA Search

Ss1.1-rcut21_j2.5

Sequence:


               
               CCATCCGCAAGGCTTAAAAACTTCAAACTCGGAAAAAAATTGGGGTTTCTAAATTCCCTG
TTGAGGGCTGTGGATGACTTTTGCAAAAGCTGTACAGGGCGCGTCTGAATTTTCATTTTC
TTTACCTGTCTCGAGCGGGGCCGCGCGCGTGTCCGCTGGAAGGGAGTGGACTCGGAGCGG
CTGGAGGGCCGGGTCCGAGGCAGAGCTGGGCTTGGAGATGCTGCCCTGGCGCACGTTCTC
GAAGGCCTCCCTTAGCTTCAGGGGGGTCCGCCGGGTGCCGGTGGACGCGAAGAAAGATGC
TGGGCAAGTGGCCGTCGGTCGTGGCACATGCCAGTGTTGACTTGGATTTTTTTTTTTTGG
AACCTGCATGCCGAGAGCGGAGGGTTCGCGTATAACCCAGATGGTGGTGATTCGGTGTGT
TCGGTTCTGTATTTCTGTTTAATAAAGTCCCTTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCATCCGCAAGGCTTAAAAACTTCAAACTCGGAAAAAAATTGGGGTTTCTAAATTCCCTG
TTGAGGGCTGTGGATGACTTTTGCAAAAGCTGTACAGGGCGCGTCTGAATTTTCATTTTC
TTTACCTGTCTCGAGCGGGGCCGCGCGCGTGTCCGCTGGAAGGGAGTGGACTCGGAGCGG
CTGGAGGGCCGGGTCCGAGGCAGAGCTGGGCTTGGAGATGCTGCCCTGGCGCACGTTCTC
GAAGGCCTCCCTTAGCTTCAGGGGGGTCCGCCGGGTGCCGGTGGACGCGAAGAAAGATGC
TGGGCAAGTGGCCGTCGGTCGTGGCACATGCCAGTGTTGACTTGGATTTTTTTTTTTTGG
AACCTGCATGCCGAGAGCGGAGGGTTCGCGTATAACCCAGATGGTGGTGATTCGGTGTGT
TCGGTTCTGTATTTCTGTTTAATAAAGTCCCTTCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-455, gnl|bosTau2|chr1 (98057302-98056865)
               

               
               1-455, gnl|Hg17|chr21 (38791985-38791546)
               

               
               1-455, gnl|Mm7|chr16 (95765982-95765547)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-455, gnl|bosTau2|chr1 (98057302-98056865)
               

               
               1-455, gnl|Hg17|chr21 (38791985-38791546)
               

               
               1-455, gnl|Mm7|chr16 (95765982-95765547)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cut (0.169924)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	1-455, gnl\|bosTau2\|chr1 (98057302-98056865)
	1-455, gnl\|Hg17\|chr21 (38791985-38791546)
	1-455, gnl\|Mm7\|chr16 (95765982-95765547)