Ss1.1-rcut27_i14.5
|
AGCCTGTTGTTCCATTTTGAGTTAATTTTTTAATGTAGTATAAGGAGTGCTATAATAAGT
TGAAAGCATGTTTTCACTCAGGATGAAGACAGATGTTTGTCCCAGGAGAAACCCTTAGTC
ACTGGCCCCTTGAAGACACCCACAAGTGTGAAAGGCCACACCTACAAACCAGACATGAGC
AATACTGCAGAATCACTAGCCACGATAAGTAGAGTGAATATTGACATCTTACCTGCAGAA
AGGAGGAACTCGGTGAACAACAGCTTAGTTCAAGAGAATCAGCCAAAACAATTAGATGCC
TCTAATGAGCTCCAGGTTAACTGTAGTATTTCTCAAGTGAAGGAGAGGCTGCAGGATAAC
ACTAAATCCAGTGCTCAGTCTGAAAACCAATTTCCTGCGTGGTCCTCTGACAATATTACT
AGAGAAAAGAATGTCTCAGTGAAGCCTCTGCAGCTCCTAAACAAAGACCAAAATTTACCA
AAGGACTGGGATCAAGTTGCTGGTGGATGTGTTACAGAAAAGCAGGACAGAATCGACCCA
AGTTTACAGCCATACAGGTCTGGGTCTGAGCCTTCCCTGTCTCGACAGCGGCGGCAGAAA
AAAAGAGGACAGACTGAGCATAGTGGGGAAAAGAGACAGTTCCAAGAGACTCCTCCCTGT
CTTTTGCCTTCTCTTCCCACTATTGGAAAAATGGATGTCACATCAACACAGAATAATGCT
GAAAACCAAAGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGCCTGTTGTTCCATTTTGAGTTAATTTTTTAATGTAGTATAAGGAGTGCTATAATAAGT
TGAAAGCATGTTTTCACTCAGGATGAAGACAGATGTTTGTCCCAGGAGAAACCCTTAGTC
ACTGGCCCCTTGAAGACACCCACAAGTGTGAAAGGCCACACCTACAAACCAGACATGAGC
AATACTGCAGAATCACTAGCCACGATAAGTAGAGTGAATATTGACATCTTACCTGCAGAA
AGGAGGAACTCGGTGAACAACAGCTTAGTTCAAGAGAATCAGCCAAAACAATTAGATGCC
TCTAATGAGCTCCAGGTTAACTGTAGTATTTCTCAAGTGAAGGAGAGGCTGCAGGATAAC
ACTAAATCCAGTGCTCAGTCTGAAAACCAATTTCCTGCGTGGTCCTCTGACAATATTACT
AGAGAAAAGAATGTCTCAGTGAAGCCTCTGCAGCTCCTAAACAAAGACCAAAATTTACCA
AAGGACTGGGATCAAGTTGCTGGTGGATGTGTTACAGAAAAGCAGGACAGAATCGACCCA
AGTTTACAGCCATACAGGTCTGGGTCTGAGCCTTCCCTGTCTCGACAGCGGCGGCAGAAA
AAAAGAGGACAGACTGAGCATAGTGGGGAAAAGAGACAGTTCCAAGAGACTCCTCCCTGT
CTTTTGCCTTCTCTTCCCACTATTGGAAAAATGGATGTCACATCAACACAGAATAATGCT
GAAAACCAAAGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
12-486, gnl|bosTau2|chr22 (39703312-39702849) |
|
12-486, gnl|Hg17|chr3 (52761461-52760991) |
|
12-486, gnl|Mm7|chr14 (28399743-28400208) |
| |
|
489-650, gnl|bosTau2|chr22 (39700776-39700614) |
|
489-650, gnl|canFam2|chr20 (40066323-40066201) |
|
489-650, gnl|danRer3|chrUn (135523191-135523273) |
|
489-650, gnl|dasNov1|scaffold_45967 (5887-5793) |
|
489-650, gnl|fr1|chrUn (75163047-75163124) |
|
489-650, gnl|galGal2|chr12 (695023-695127) |
|
489-650, gnl|hg17|chr3 (52755792-52755914) |
|
489-650, gnl|Hg17|chr3 (52755961-52755799) |
|
489-650, gnl|loxAfr1|scaffold_102 (97321-97199) |
|
489-650, gnl|mm7|chr14 (28404023-28403904) |
|
489-650, gnl|Mm7|chr14 (28403861-28404014) |
|
489-650, gnl|monDom2|scaffold_5 (70223291-70223169) |
|
489-650, gnl|oryCun1|scaffold_185064 (4159-4263) |
|
489-650, gnl|panTro1|chr2 (54391487-54391609) |
|
489-650, gnl|rheMac2|chr2 (83604448-83604326) |
|
489-650, gnl|rn3|chr16 (6408044-6407927) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
12-486, gnl|bosTau2|chr22 (39703312-39702849) |
|
12-486, gnl|Hg17|chr3 (52761461-52760991) |
|
12-486, gnl|Mm7|chr14 (28399743-28400208) |
| |
|
489-650, gnl|bosTau2|chr22 (39700776-39700614) |
|
489-650, gnl|canFam2|chr20 (40066323-40066201) |
|
489-650, gnl|danRer3|chrUn (135523191-135523273) |
|
489-650, gnl|dasNov1|scaffold_45967 (5887-5793) |
|
489-650, gnl|fr1|chrUn (75163047-75163124) |
|
489-650, gnl|galGal2|chr12 (695023-695127) |
|
489-650, gnl|hg17|chr3 (52755792-52755914) |
|
489-650, gnl|Hg17|chr3 (52755961-52755799) |
|
489-650, gnl|loxAfr1|scaffold_102 (97321-97199) |
|
489-650, gnl|mm7|chr14 (28404023-28403904) |
|
489-650, gnl|Mm7|chr14 (28403861-28404014) |
|
489-650, gnl|monDom2|scaffold_5 (70223291-70223169) |
|
489-650, gnl|oryCun1|scaffold_185064 (4159-4263) |
|
489-650, gnl|panTro1|chr2 (54391487-54391609) |
|
489-650, gnl|rheMac2|chr2 (83604448-83604326) |
|
489-650, gnl|rn3|chr16 (6408044-6407927) |
|
cut (0.169924) |
|
eep (0.122564) |
|
cut (0.169924) |
|
eep (0.122564) |
