Ss1.1-rcut32_o9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATGGCAGGCTTTCTCTGGTGTTTCTAGTATGAATTCCACATCTTGGCCTCTTATCCAGC TCCAACAGTCTCAGCTCCATCATCTGGAGGACAAATGAAATTTGCATGAGTTGCAAACTC TTGAGCTGAATGAAATACGGACTGCAGTGCTAATATCCTTTTCTTCTAGTTGTTATTGAC AGAAAGTTAAATGTCGTCGGAAGACCGAGAAGCTCAGGAGGATGAGTTGCTGGCCCTGGC GAGTATTTATGATGGAGATGAATTCCGAAAAGCAGAGTCTGTCCAAGGTGGAGAAACCAG GATCTATTTGGACTTGCCCCAAAATTTCAAGATATTTGTGAGCGGTCAGTTCATATTATC TAAAACAGATTTTTCTAAATAAAGGTTCTTCTCAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATGGCAGGCTTTCTCTGGTGTTTCTAGTATGAATTCCACATCTTGGCCTCTTATCCAGC TCCAACAGTCTCAGCTCCATCATCTGGAGGACAAATGAAATTTGCATGAGTTGCAAACTC TTGAGCTGAATGAAATACGGACTGCAGTGCTAATATCCTTTTCTTCTAGTTGTTATTGAC AGAAAGTTAAATGTCGTCGGAAGACCGAGAAGCTCAGGAGGATGAGTTGCTGGCCCTGGC GAGTATTTATGATGGAGATGAATTCCGAAAAGCAGAGTCTGTCCAAGGTGGAGAAACCAG GATCTATTTGGACTTGCCCCAAAATTTCAAGATATTTGTGAGCGGTCAGTTCATATTATC TAAAACAGATTTTTCTAAATAAAGGTTCTTCTCAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 180-395, gnl|bosTau2|chr7 (35800235-35800019) | |
| 180-395, gnl|canFam2|chr2 (39766266-39766098) | |
| 180-395, gnl|danRer3|chrNA (251239038-251239203) | |
| 180-395, gnl|dasNov1|scaffold_33509 (7133-7301) | |
| 180-395, gnl|echTel1|scaffold_284856 (26682-26515) | |
| 180-395, gnl|fr1|chrUn (207340087-207339912) | |
| 180-395, gnl|galGal2|chr13 (16190297-16190130) | |
| 180-395, gnl|hg17|chr2 (139004469-139004637) | |
| 180-395, gnl|Hg17|chr5 (141333337-141333534) | |
| 180-395, gnl|loxAfr1|scaffold_45871 (32160-32327) | |
| 180-395, gnl|mm7|chr18 (38676791-38676628) | |
| 180-395, gnl|Mm7|chr18 (38676628-38676885) | |
| 180-395, gnl|monDom2|scaffold_6 (66598928-66599096) | |
| 180-395, gnl|oryCun1|scaffold_132732 (14393-14235) | |
| 180-395, gnl|panTro1|chr13 (28020536-28020704) | |
| 180-395, gnl|rheMac2|chr12 (1861205-1861369) | |
| 180-395, gnl|rn3|chr2 (94732875-94732719) | |
| 180-395, gnl|tetNig1|chr7 (9021638-9021484) | |
| 180-395, gnl|xenTro1|scaffold_2012 (27785-27627) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 180-395, gnl|bosTau2|chr7 (35800235-35800019) | |
| 180-395, gnl|canFam2|chr2 (39766266-39766098) | |
| 180-395, gnl|danRer3|chrNA (251239038-251239203) | |
| 180-395, gnl|dasNov1|scaffold_33509 (7133-7301) | |
| 180-395, gnl|echTel1|scaffold_284856 (26682-26515) | |
| 180-395, gnl|fr1|chrUn (207340087-207339912) | |
| 180-395, gnl|galGal2|chr13 (16190297-16190130) | |
| 180-395, gnl|hg17|chr2 (139004469-139004637) | |
| 180-395, gnl|Hg17|chr5 (141333337-141333534) | |
| 180-395, gnl|loxAfr1|scaffold_45871 (32160-32327) | |
| 180-395, gnl|mm7|chr18 (38676791-38676628) | |
| 180-395, gnl|Mm7|chr18 (38676628-38676885) | |
| 180-395, gnl|monDom2|scaffold_6 (66598928-66599096) | |
| 180-395, gnl|oryCun1|scaffold_132732 (14393-14235) | |
| 180-395, gnl|panTro1|chr13 (28020536-28020704) | |
| 180-395, gnl|rheMac2|chr12 (1861205-1861369) | |
| 180-395, gnl|rn3|chr2 (94732875-94732719) | |
| 180-395, gnl|tetNig1|chr7 (9021638-9021484) | |
| 180-395, gnl|xenTro1|scaffold_2012 (27785-27627) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| pro (0.512033) | |
| cut (0.339847) | |
| sto (0.179824) | |
| cki (0.165235) | |
| che (0.136314) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pro (0.512033) | |
| cut (0.339847) | |
| sto (0.179824) | |
| cki (0.165235) | |
| che (0.136314) |