Ss1.1-rcut34_e23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACAGACAGACCCCGCTCTCCTGTCTCTGACTTGGGACCAGGTTCTTATCTTGCCACCGGG CATGTTTCTGAAAGGCGAGCCTGAGCAGGTCAAAGGTGAGGCGTGAGAGGCATTTTTAGG AGGGACCAGGGAAGGCTGAGCCTGGGGACACTTCTGAGCACATTTCTCTATTTCTGTAAA TAGCCATGTATAGAAGATGGAAGAGTAGCCTGGGGTTTATCCAGAGATGGGCTTGGTTTT TTTGGGTTGTTTGGTTTTTTGGGTTTTTGGGTTTTTTGGGTTGTTTTTATATTACCTCAT TCAGCAAGTTTATGTTTCACAATGACTCAATGATGCTTTATTTATATTGTTTGTACTGTA ATTAAAACCATTGACAGACATTTCACTTTGCTTGTTATTTCATATGATCTTGTTTTGATT AAATATGCCAGTTTGTATTTTCCTGCCTTGGGATTTTTTTTGTGTCAGCTGTACAGTATT CTAAGGGGGGAAAAAAAAGAAAAAGAAAAATGTGTAAAGTAATGAAAAGAAGTGGCTATA GTGTAGAGGCCTCTTTCTAATAAAGAAATGAAAATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACAGACAGACCCCGCTCTCCTGTCTCTGACTTGGGACCAGGTTCTTATCTTGCCACCGGG CATGTTTCTGAAAGGCGAGCCTGAGCAGGTCAAAGGTGAGGCGTGAGAGGCATTTTTAGG AGGGACCAGGGAAGGCTGAGCCTGGGGACACTTCTGAGCACATTTCTCTATTTCTGTAAA TAGCCATGTATAGAAGATGGAAGAGTAGCCTGGGGTTTATCCAGAGATGGGCTTGGTTTT TTTGGGTTGTTTGGTTTTTTGGGTTTTTGGGTTTTTTGGGTTGTTTTTATATTACCTCAT TCAGCAAGTTTATGTTTCACAATGACTCAATGATGCTTTATTTATATTGTTTGTACTGTA ATTAAAACCATTGACAGACATTTCACTTTGCTTGTTATTTCATATGATCTTGTTTTGATT AAATATGCCAGTTTGTATTTTCCTGCCTTGGGATTTTTTTTGTGTCAGCTGTACAGTATT CTAAGGGGGGAAAAAAAAGAAAAAGAAAAATGTGTAAAGTAATGAAAAGAAGTGGCTATA GTGTAGAGGCCTCTTTCTAATAAAGAAATGAAAATA |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 2-244, gnl|bosTau2|chr3 (82212826-82213066) | |
| 2-244, gnl|canFam2|chr25 (50003513-50004056) | |
| 2-244, gnl|dasNov1|scaffold_6170 (5032-5561) | |
| 2-244, gnl|galGal2|chr7 (5105311-5104823) | |
| 2-244, gnl|hg17|chr2 (236821889-236822367) | |
| 2-244, gnl|Hg17|chr2 (236821913-236822130) | |
| 2-244, gnl|loxAfr1|scaffold_17580 (39165-38661) | |
| 2-244, gnl|mm7|chr1 (89799540-89799987) | |
| 2-244, gnl|monDom2|scaffold_161 (1560531-1560038) | |
| 2-244, gnl|panTro1|chr13 (127679407-127679888) | |
| 2-244, gnl|rheMac2|chr12 (100013975-100014468) | |
| 2-244, gnl|rn3|chr9 (89202856-89203319) | |
| 254-576, gnl|bosTau2|chr3 (82213053-82213374) | |
| 254-576, gnl|canFam2|chr25 (50003513-50004056) | |
| 254-576, gnl|dasNov1|scaffold_6170 (5032-5561) | |
| 254-576, gnl|galGal2|chr7 (5105311-5104823) | |
| 254-576, gnl|hg17|chr2 (236821889-236822367) | |
| 254-576, gnl|Hg17|chr2 (236822125-236822431) | |
| 254-576, gnl|loxAfr1|scaffold_17580 (39165-38661) | |
| 254-576, gnl|mm7|chr1 (89799540-89799987) | |
| 254-576, gnl|Mm7|chr1 (89799757-89800051) | |
| 254-576, gnl|monDom2|scaffold_161 (1560531-1560038) | |
| 254-576, gnl|panTro1|chr13 (127679407-127679888) | |
| 254-576, gnl|rheMac2|chr12 (100013975-100014468) | |
| 254-576, gnl|rn3|chr9 (89202856-89203319) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-244, gnl|bosTau2|chr3 (82212826-82213066) | |
| 2-244, gnl|canFam2|chr25 (50003513-50004056) | |
| 2-244, gnl|dasNov1|scaffold_6170 (5032-5561) | |
| 2-244, gnl|galGal2|chr7 (5105311-5104823) | |
| 2-244, gnl|hg17|chr2 (236821889-236822367) | |
| 2-244, gnl|Hg17|chr2 (236821913-236822130) | |
| 2-244, gnl|loxAfr1|scaffold_17580 (39165-38661) | |
| 2-244, gnl|mm7|chr1 (89799540-89799987) | |
| 2-244, gnl|monDom2|scaffold_161 (1560531-1560038) | |
| 2-244, gnl|panTro1|chr13 (127679407-127679888) | |
| 2-244, gnl|rheMac2|chr12 (100013975-100014468) | |
| 2-244, gnl|rn3|chr9 (89202856-89203319) | |
| 254-576, gnl|bosTau2|chr3 (82213053-82213374) | |
| 254-576, gnl|canFam2|chr25 (50003513-50004056) | |
| 254-576, gnl|dasNov1|scaffold_6170 (5032-5561) | |
| 254-576, gnl|galGal2|chr7 (5105311-5104823) | |
| 254-576, gnl|hg17|chr2 (236821889-236822367) | |
| 254-576, gnl|Hg17|chr2 (236822125-236822431) | |
| 254-576, gnl|loxAfr1|scaffold_17580 (39165-38661) | |
| 254-576, gnl|mm7|chr1 (89799540-89799987) | |
| 254-576, gnl|Mm7|chr1 (89799757-89800051) | |
| 254-576, gnl|monDom2|scaffold_161 (1560531-1560038) | |
| 254-576, gnl|panTro1|chr13 (127679407-127679888) | |
| 254-576, gnl|rheMac2|chr12 (100013975-100014468) | |
| 254-576, gnl|rn3|chr9 (89202856-89203319) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| ece (0.229305) | |
| cut (0.169924) | |
| cje (0.165235) | |
| lnt (0.142308) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| cut (0.169924) | |
| cje (0.165235) | |
| lnt (0.142308) |