Non-Coding RNA Search

Ss1.1-rcut40_c9.5

Sequence:


               
               TGAGCCATTGTCACGGGCAGCAGGGAGCAGCAGGCAGTTCAGGAAGGACCACAGGCACTG
TTCAGCATCTCCTCCCCCCTTCAGCCTGCCAGGGACTTGACAGGGCAGGAAGGTACACAG
AACACCAGTGTCTGCCCCTGCAAACTACTTAAGAAGTTCAACCTGGGTCTTATAACCTGT
GATTTAGCAGTTGAGTGACTTTGGAATTCATAAAAATGACATTGACCTGGTTCTCGCACA
CTTGGTCATGACATAATGGAGTAATTTTAGGGGGTTTCTGGCTGACTTTTATGTCAGGGA
TATGGGTAAACTTTTAAAGCTTTTATCTTTAGAAAATGTTGCAAATGGATTATAAGATGC
CACTTTAAGACAGTCTATTGAAGGAAAAATCTTTGGTGTGTAACGGAAGTGGTGTGGCTT
TTGATGCTCCTATTTGAAGGCAAGGGAGGGTTGCTTTGAATAAAAGTTGATATGTAATTG
CTGTGATGATTAAGTTGCATGATCACATGGGGCCACCCTGAGGTAGAAAGGACAAAGGAG
TATTGAGGAGCTGGAAAGGGAGCATTCAGGCTGAAACTAAGCCAGAAGATAACTTGGGTC
AATTAAAAGTGTGTTGGCAAAACGGCAATGAAATACATCTGGCTTAAAAGAAACATTAAA
GAATGACATTTGTAAGTAAAATGTGTGTTTTTGATATTTTTAGGGTAAAGATCAATGCAA
AAGATAGGCTTTTCTATTTCATATGGGTTGTCTTTTTCCTATTTATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGCCATTGTCACGGGCAGCAGGGAGCAGCAGGCAGTTCAGGAAGGACCACAGGCACTG
TTCAGCATCTCCTCCCCCCTTCAGCCTGCCAGGGACTTGACAGGGCAGGAAGGTACACAG
AACACCAGTGTCTGCCCCTGCAAACTACTTAAGAAGTTCAACCTGGGTCTTATAACCTGT
GATTTAGCAGTTGAGTGACTTTGGAATTCATAAAAATGACATTGACCTGGTTCTCGCACA
CTTGGTCATGACATAATGGAGTAATTTTAGGGGGTTTCTGGCTGACTTTTATGTCAGGGA
TATGGGTAAACTTTTAAAGCTTTTATCTTTAGAAAATGTTGCAAATGGATTATAAGATGC
CACTTTAAGACAGTCTATTGAAGGAAAAATCTTTGGTGTGTAACGGAAGTGGTGTGGCTT
TTGATGCTCCTATTTGAAGGCAAGGGAGGGTTGCTTTGAATAAAAGTTGATATGTAATTG
CTGTGATGATTAAGTTGCATGATCACATGGGGCCACCCTGAGGTAGAAAGGACAAAGGAG
TATTGAGGAGCTGGAAAGGGAGCATTCAGGCTGAAACTAAGCCAGAAGATAACTTGGGTC
AATTAAAAGTGTGTTGGCAAAACGGCAATGAAATACATCTGGCTTAAAAGAAACATTAAA
GAATGACATTTGTAAGTAAAATGTGTGTTTTTGATATTTTTAGGGTAAAGATCAATGCAA
AAGATAGGCTTTTCTATTTCATATGGGTTGTCTTTTTCCTATTTATAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-768, gnl|bosTau2|chr18 (13763981-13763189)
               

               
               1-768, gnl|Hg17|chr16 (68055412-68056171)
               

               
               1-768, gnl|Mm7|chr8 (105785318-105786177)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-768, gnl|bosTau2|chr18 (13763981-13763189)
               

               
               1-768, gnl|Hg17|chr16 (68055412-68056171)
               

               
               1-768, gnl|Mm7|chr8 (105785318-105786177)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               cut (0.169924)
               

               
               ute (0.132784)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)
               

               
               ute (0.132784)

	1-768, gnl\|bosTau2\|chr18 (13763981-13763189)
	1-768, gnl\|Hg17\|chr16 (68055412-68056171)
	1-768, gnl\|Mm7\|chr8 (105785318-105786177)