Non-Coding RNA Search

Ss1.1-rdbla0103_b14.5

Sequence:


               
               GTGTGTGTGTGTGTGTGTTTGGAGTAGTATATAGTCCATTTGAAATAGAAATCAAACAGA
TCCTTCACCATGCTGTTATCTGGATGGAATAACTCACCATTGGATGTAATGGCCTAACAT
CTAGCTGTTGCCCCTTGTGGGAATTTTTCTCTTGTTATTAGGTAGGGAAGTGAAGGGGAA
AATGTTATGGAAGCAAATTGTAGAATCTTAGGCATCCTGTTTGTTCATGCCATGGATGTT
TGCTCTGGACTTCAAATCTCTAGTTTGAAAGAGGCCTTGGAAAAACAAATAATTCACAGT
GTGAATTTTCTTGTAGCCGGTATCACAAAAATCTCACCTATTCCAGGTTTGAAAATCTAC
ATGTGTATTCGAATGTAAATCACTGTTTTCTTGGAACCCCCCAATTGTCTCTTAAAAATT
ACATTGAATCTAAATATGTATTACTTCAGCCTTTCTTACACAGTGCTTCTAAAAGACTTT
TGGTCCCTGAATGGATGCCTTTATGTGTATAGAATCATGTGTTATGTGTAGCTTTAAAGA
CAGTTTCAGAATGCCTCAGATGAATGACATTTTTTAAAGCTGTTACAATTGATATCTATA
GGCTCTTCTATCTCATGTTGATTCACAATCCAGAAAGTTTTGTTATGTATTTAAGAAATT
GCTGTTGTATTATATTTTTCCAAGTATTTGAGAAGAAAATAGCTGTTTTAGTCTCTCTGG
CCCCAATAAATGTGGAGCAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGTGTGTGTGTGTGTGTTTGGAGTAGTATATAGTCCATTTGAAATAGAAATCAAACAGA
TCCTTCACCATGCTGTTATCTGGATGGAATAACTCACCATTGGATGTAATGGCCTAACAT
CTAGCTGTTGCCCCTTGTGGGAATTTTTCTCTTGTTATTAGGTAGGGAAGTGAAGGGGAA
AATGTTATGGAAGCAAATTGTAGAATCTTAGGCATCCTGTTTGTTCATGCCATGGATGTT
TGCTCTGGACTTCAAATCTCTAGTTTGAAAGAGGCCTTGGAAAAACAAATAATTCACAGT
GTGAATTTTCTTGTAGCCGGTATCACAAAAATCTCACCTATTCCAGGTTTGAAAATCTAC
ATGTGTATTCGAATGTAAATCACTGTTTTCTTGGAACCCCCCAATTGTCTCTTAAAAATT
ACATTGAATCTAAATATGTATTACTTCAGCCTTTCTTACACAGTGCTTCTAAAAGACTTT
TGGTCCCTGAATGGATGCCTTTATGTGTATAGAATCATGTGTTATGTGTAGCTTTAAAGA
CAGTTTCAGAATGCCTCAGATGAATGACATTTTTTAAAGCTGTTACAATTGATATCTATA
GGCTCTTCTATCTCATGTTGATTCACAATCCAGAAAGTTTTGTTATGTATTTAAGAAATT
GCTGTTGTATTATATTTTTCCAAGTATTTGAGAAGAAAATAGCTGTTTTAGTCTCTCTGG
CCCCAATAAATGTGGAGCAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               160-744, gnl|bosTau2|chr1 (94045891-94045320)
               

               
               160-744, gnl|Hg17|chr6 (18576498-18577080)
               

               
               160-744, gnl|Mm7|chr13 (46729493-46730083)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               160-744, gnl|bosTau2|chr1 (94045891-94045320)
               

               
               160-744, gnl|Hg17|chr6 (18576498-18577080)
               

               
               160-744, gnl|Mm7|chr13 (46729493-46730083)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               sin (0.174948)
               

               
               bla (0.124347)
               

               
               med (0.116252)
               

               
               cbl (0.114797)
               

               
               jca (0.11396)
               

               
               nbm (0.0993246)
               

               
               ldo (0.0970026)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               bla (0.124347)
               

               
               med (0.116252)
               

               
               cbl (0.114797)
               

               
               jca (0.11396)
               

               
               nbm (0.0993246)
               

               
               ldo (0.0970026)

	160-744, gnl\|bosTau2\|chr1 (94045891-94045320)
	160-744, gnl\|Hg17\|chr6 (18576498-18577080)
	160-744, gnl\|Mm7\|chr13 (46729493-46730083)

	sin (0.174948)
	bla (0.124347)
	med (0.116252)
	cbl (0.114797)
	jca (0.11396)
	nbm (0.0993246)
	ldo (0.0970026)