Non-Coding RNA Search

Ss1.1-rdbla0103_p2.5

Sequence:


               
               GTTGAGAGGACCAAGTGGGGTAGTGATGATGGAACACAGTGAAAATATAAGGCTTCTTAG
CTCAGATTTTGTCCCAAACACCACAGACAGAGATTGGGTAAGTTTCTCATCTACAATGTG
CTTTGCATTTCTGTGAGGTCATGGTCTCCGTTATCTCTTCTTTGTTGAAGAATGGACCAC
TGGAAGTACTCATTCCAGGAAAGCGAGATTCCCGAGAGAGATGTGATCCCATATCTGACT
TCCCAGCCACCTCCTGCCACTTACTATGTCCATAGCCCAGAGGGCCAAGCTCTTGGAATC
AATAATTACCTTAATTATCTTTAAGGATCCAGTAACCAATTTAGAAGTCGAAGCAGCTTT
AAGGTTATATCCAGCAACGATCTGTTTGCTGCACAGTAAGAGAGTCGCCTAGCATGTCTA
AGTTTGAAAGGTCTTAACTAATTGATGCATTAAATAATCGATCCTTGAAGGCTAAAAGAG
TCAAGTCTTTTTTCATAATTAAAAAAAACCACAGAGAAATGAAGGATGAATCAAATCAGG
GAATGACAGAGCAAAAGAGGGTTTCACAAAATAGGTCTTAATGTGTTGCCATTTCACAGG
GGAGAAAACCAAGGCCTCACACATTTAATGATATACTTTCTTTGTGGCTCGGGTTTCATA
GCTTGTTAGTGGCAGAATCAAGAATCTAAAACCAGCTCTAAGAAACAAATGTCCTGATCT
TTTTTTTTTTTAATAATTTTTTTTTATTTTCCCACTGTACAGCAAGGGGGTCAGGTTATC
CTTACATGTGTACATTACAATTACATTTTTTCCCCC------------CTTTGTATTTGG
ATTTAGATTTGAAAAGACCTTCAGCACATAGATGAGACACTCAGAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGAGAGGACCAAGTGGGGTAGTGATGATGGAACACAGTGAAAATATAAGGCTTCTTAG
CTCAGATTTTGTCCCAAACACCACAGACAGAGATTGGGTAAGTTTCTCATCTACAATGTG
CTTTGCATTTCTGTGAGGTCATGGTCTCCGTTATCTCTTCTTTGTTGAAGAATGGACCAC
TGGAAGTACTCATTCCAGGAAAGCGAGATTCCCGAGAGAGATGTGATCCCATATCTGACT
TCCCAGCCACCTCCTGCCACTTACTATGTCCATAGCCCAGAGGGCCAAGCTCTTGGAATC
AATAATTACCTTAATTATCTTTAAGGATCCAGTAACCAATTTAGAAGTCGAAGCAGCTTT
AAGGTTATATCCAGCAACGATCTGTTTGCTGCACAGTAAGAGAGTCGCCTAGCATGTCTA
AGTTTGAAAGGTCTTAACTAATTGATGCATTAAATAATCGATCCTTGAAGGCTAAAAGAG
TCAAGTCTTTTTTCATAATTAAAAAAAACCACAGAGAAATGAAGGATGAATCAAATCAGG
GAATGACAGAGCAAAAGAGGGTTTCACAAAATAGGTCTTAATGTGTTGCCATTTCACAGG
GGAGAAAACCAAGGCCTCACACATTTAATGATATACTTTCTTTGTGGCTCGGGTTTCATA
GCTTGTTAGTGGCAGAATCAAGAATCTAAAACCAGCTCTAAGAAACAAATGTCCTGATCT
TTTTTTTTTTTAATAATTTTTTTTTATTTTCCCACTGTACAGCAAGGGGGTCAGGTTATC
CTTACATGTGTACATTACAATTACATTTTTTCCCCC------------CTTTGTATTTGG
ATTTAGATTTGAAAAGACCTTCAGCACATAGATGAGACACTCAGAGAC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               4-447, gnl|bosTau2|chr26 (22790085-22789638)
               

               
               4-447, gnl|Hg17|chr10 (115530702-115531771)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-447, gnl|bosTau2|chr26 (22790085-22789638)
               

               
               4-447, gnl|Hg17|chr10 (115530702-115531771)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               bla (0.248694)
               

               
               cmu (0.186393)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.248694)
               

               
               cmu (0.186393)

	4-447, gnl\|bosTau2\|chr26 (22790085-22789638)
	4-447, gnl\|Hg17\|chr10 (115530702-115531771)