Non-Coding RNA Search

Ss1.1-rdbla0108_i21.5

Sequence:


               
               TTTGGAATGTCCACAAAATAGAATACTTACCAGTGTTTAAATGATTGAGTTACAAGTATA
TGTACTGCTAAGGAATGAATACCACTATATTGTTAATTTCAGAAAAAATCAAACCTAGTG
GTTATGGGTTGGAGGGGGAAGGGAGGGGTCAAGATAGAGGTAGGAGATTGAGAGGTACAA
ACTACTTTGTATAAACTACAAGGATATATGGTACAATGCAGGGAATAGAGCCATTGTTTT
ATGATAACTGTGAAAAGAATATAACCTTTAAATATTGTGAACCACTATTTTGAACACCTA
AAACTTACATAAAATTGTATATCATTGATAACTCAGTTTTTTAAAAAGGGAAAAGAAAAA
TATCACTGGCAAAAAAAAAAAAAAGAGTCAAATTGCAGACTAATACCTGAAGTATGATTT
TGTGTATATGTCCACATATGCCTGTGAATACATTCTTGCATGTAAGGAAGTTGGGAACCG
ATGCCCATTTATTGGGAATGGTCACTTCTGGGGAAGGTAAAAGAGGGGAAAGAAGGGGTT
AGTTGAGGGCTGAAATGAGACGTAAGTTTTTGTTCAGCATATTTCTGTATTTTTGAATCT
TGGACAATGAGAATGTATTCATGAATTCTGATGTAATTTATAACACAGCAAAGATGAAGA
AAAAAGTGAATAGAAGATGGGCTATAGGAACAATGGATTGCCTTTGGATTTTAGTGTTAC
TGTTCTGCTAACATGCTTGAGAATATATGGAAGATAAATATTAATCCCTTCAAGTTCAAC
TCACATGGTCTTTTCTAAAGACCTTTAACTGAGGAGGCAACGGATGTGTTGATTTTAATC
TCCAAAAACTCCTGCCAAGGCCCACCGAGTCCACCTGATTTAGGATTTTACCCCAGGGAC
AGTAAAATCCTCACTGAAAAGTTTACATGCAATTTTGTAGGAACTTGAAAGGAAAGGCTG
TATTTTAATTGTGTATAATTATTACAGGTGGAGCAACAAGCTCCCTGATCAAAGGTGCTA
AATATGCTGTTACTGTTTTGAGAAAGTTTTGCTGTTTGGAAAGAGCTTACTTGGGGCAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGGAATGTCCACAAAATAGAATACTTACCAGTGTTTAAATGATTGAGTTACAAGTATA
TGTACTGCTAAGGAATGAATACCACTATATTGTTAATTTCAGAAAAAATCAAACCTAGTG
GTTATGGGTTGGAGGGGGAAGGGAGGGGTCAAGATAGAGGTAGGAGATTGAGAGGTACAA
ACTACTTTGTATAAACTACAAGGATATATGGTACAATGCAGGGAATAGAGCCATTGTTTT
ATGATAACTGTGAAAAGAATATAACCTTTAAATATTGTGAACCACTATTTTGAACACCTA
AAACTTACATAAAATTGTATATCATTGATAACTCAGTTTTTTAAAAAGGGAAAAGAAAAA
TATCACTGGCAAAAAAAAAAAAAAGAGTCAAATTGCAGACTAATACCTGAAGTATGATTT
TGTGTATATGTCCACATATGCCTGTGAATACATTCTTGCATGTAAGGAAGTTGGGAACCG
ATGCCCATTTATTGGGAATGGTCACTTCTGGGGAAGGTAAAAGAGGGGAAAGAAGGGGTT
AGTTGAGGGCTGAAATGAGACGTAAGTTTTTGTTCAGCATATTTCTGTATTTTTGAATCT
TGGACAATGAGAATGTATTCATGAATTCTGATGTAATTTATAACACAGCAAAGATGAAGA
AAAAAGTGAATAGAAGATGGGCTATAGGAACAATGGATTGCCTTTGGATTTTAGTGTTAC
TGTTCTGCTAACATGCTTGAGAATATATGGAAGATAAATATTAATCCCTTCAAGTTCAAC
TCACATGGTCTTTTCTAAAGACCTTTAACTGAGGAGGCAACGGATGTGTTGATTTTAATC
TCCAAAAACTCCTGCCAAGGCCCACCGAGTCCACCTGATTTAGGATTTTACCCCAGGGAC
AGTAAAATCCTCACTGAAAAGTTTACATGCAATTTTGTAGGAACTTGAAAGGAAAGGCTG
TATTTTAATTGTGTATAATTATTACAGGTGGAGCAACAAGCTCCCTGATCAAAGGTGCTA
AATATGCTGTTACTGTTTTGAGAAAGTTTTGCTGTTTGGAAAGAGCTTACTTGGGGCAGA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               235-827, gnl|bosTau2|chr8 (26041886-26041298)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               235-827, gnl|bosTau2|chr8 (26041886-26041298)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               bla (0.124347)