Non-Coding RNA Search

Ss1.1-rdbla0112_i20.5

Sequence:


               
               TCACTGCTGTCATTTTGTTTTCTGGGCCAAGAGTTAGAGAAAAATGAGCTCAGACCAAGG
GGCTTTATGTTACCTAGACAACCACACAAAGCAGGAGTTCTTAATTGATTTCTACAGCCC
TTTCCTGCTTGGAGGCATCTATGGTTTTGCATAACCCCTGTCATTTAATTGATAATGCTG
CACGTTACCCCCTGCTGTGTTACTGTGACCAAGACAAAATGAACTCTCCCCTTGGTGTTC
ATGAGCAGCTGTCAGGACAGCCAGCAGCAGTTCTGCCCTGACTGATCACTTCCACAACTG
CTGCCCAGGACTCCTGGCTCCAGCGGAGCTTCCAGGTATGTACCTGACATCTGTATGTTT
CCACTTGCCTTGCACCTCTGTACCTGGTTCAGTGATTTCCACATCAGTCCAGGATTTAAA
GGAAGAACTTTTTCACAGGGAGTGTAGCCTGTAACTCTGTGGCATATAAACCCATGACGT
TTATCCTTAACTGTGTGTGTTAGGTGACGGGCAAGGTGGGAAAAGAATTCTTTAAACAGA
GGGCCAAGACCAAATTGTGAAAGTATTTCAATACGATGAGAATAAACACTGAAGAGGTCT
TTTCAGTAGTGCTGTGTTTGGAGAAAGCATCAACACAGAAGATTTTTAAGGGAATAGGTA
TCGGGTGGGTTTGTTTTTAATTCAGTTGTATGATGAATGTAACAAACTAATTAGAAGGAA
CTGCGTATAAATTAGCACCGCTTTTAAATGCCAACAATGAATTGGAAGTGAATTTCCTGT
GTGATGTCAACATTTAATGTCTCTCTGTTTAGGTTTCAAATGATGACAAGAATTATAGCA
ACAATGAAAACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACTGCTGTCATTTTGTTTTCTGGGCCAAGAGTTAGAGAAAAATGAGCTCAGACCAAGG
GGCTTTATGTTACCTAGACAACCACACAAAGCAGGAGTTCTTAATTGATTTCTACAGCCC
TTTCCTGCTTGGAGGCATCTATGGTTTTGCATAACCCCTGTCATTTAATTGATAATGCTG
CACGTTACCCCCTGCTGTGTTACTGTGACCAAGACAAAATGAACTCTCCCCTTGGTGTTC
ATGAGCAGCTGTCAGGACAGCCAGCAGCAGTTCTGCCCTGACTGATCACTTCCACAACTG
CTGCCCAGGACTCCTGGCTCCAGCGGAGCTTCCAGGTATGTACCTGACATCTGTATGTTT
CCACTTGCCTTGCACCTCTGTACCTGGTTCAGTGATTTCCACATCAGTCCAGGATTTAAA
GGAAGAACTTTTTCACAGGGAGTGTAGCCTGTAACTCTGTGGCATATAAACCCATGACGT
TTATCCTTAACTGTGTGTGTTAGGTGACGGGCAAGGTGGGAAAAGAATTCTTTAAACAGA
GGGCCAAGACCAAATTGTGAAAGTATTTCAATACGATGAGAATAAACACTGAAGAGGTCT
TTTCAGTAGTGCTGTGTTTGGAGAAAGCATCAACACAGAAGATTTTTAAGGGAATAGGTA
TCGGGTGGGTTTGTTTTTAATTCAGTTGTATGATGAATGTAACAAACTAATTAGAAGGAA
CTGCGTATAAATTAGCACCGCTTTTAAATGCCAACAATGAATTGGAAGTGAATTTCCTGT
GTGATGTCAACATTTAATGTCTCTCTGTTTAGGTTTCAAATGATGACAAGAATTATAGCA
ACAATGAAAACA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               465-751, gnl|bosTau2|chr20 (34889484-34889773)
               

               
               465-751, gnl|Hg17|chr5 (14665509-14665782)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               465-751, gnl|bosTau2|chr20 (34889484-34889773)
               

               
               465-751, gnl|Hg17|chr5 (14665509-14665782)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               pla (0.133672)
               

               
               sug (0.127291)
               

               
               bla (0.124347)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               sug (0.127291)
               

               
               bla (0.124347)

	465-751, gnl\|bosTau2\|chr20 (34889484-34889773)
	465-751, gnl\|Hg17\|chr5 (14665509-14665782)