Non-Coding RNA Search

Ss1.1-rdbla0115_i13.5

Sequence:


               
               CAAGAAGAAGGTTCTGCAGCCCGCGGCGTCATGTCACAGCTGAGCTCTTTGATCTGTAGC
ACAAAGGCCGTTGGGCTTCCCACAAGTATACCGTCTTCATCTTTAAGAAAGAATTTAGTT
GCTTCTCTTAGGAGTCCCAAGGGCACGATAATTTATTTTATTTTTTATTTTTTGGTCTTG
CCCGCTGCATGTGGAAGTTTTCAGGCCAGGGATCGAACCCGAGCCACTGCAGTGACCACT
ATCCTGGAGTAGTTGTTTCAGCAGCCACAGCCTGGCGCATTGGCCTTGCCTGGAGGAGAG
TCACCAGGTGTCCTGTATGGAGGAGCCAGAGTTCCCCCTTCCAGGGCTGGACGCTGTCCT
TCAAACCCCGTGTCTGCTCTCCCTGCACTTGGTTTTCTTTATGAAACGGTGATTTCCCGT
GAGCAACTGTGTCTCAGCACTTAAATCCTCTCTGTATTCACTGGAAAACCTCAGAGACAG
CATCTGCCATGAGCCTCCCCCTGGAGCAGCCTTAACCCACACTTCCAGCCAAAGTCCCTA
CCCTGTCACCTCACCCTGTGCTCTTTGAGTGTCTGGCGGGTACAGTATTCCTTTTCAGTA
TCCCCGAAGCTGTGACGGGGGAGTCCCCACTTACCTAGAAAGCATTACCAGGCGATTCTC
TGGCATTCTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAGAAGAAGGTTCTGCAGCCCGCGGCGTCATGTCACAGCTGAGCTCTTTGATCTGTAGC
ACAAAGGCCGTTGGGCTTCCCACAAGTATACCGTCTTCATCTTTAAGAAAGAATTTAGTT
GCTTCTCTTAGGAGTCCCAAGGGCACGATAATTTATTTTATTTTTTATTTTTTGGTCTTG
CCCGCTGCATGTGGAAGTTTTCAGGCCAGGGATCGAACCCGAGCCACTGCAGTGACCACT
ATCCTGGAGTAGTTGTTTCAGCAGCCACAGCCTGGCGCATTGGCCTTGCCTGGAGGAGAG
TCACCAGGTGTCCTGTATGGAGGAGCCAGAGTTCCCCCTTCCAGGGCTGGACGCTGTCCT
TCAAACCCCGTGTCTGCTCTCCCTGCACTTGGTTTTCTTTATGAAACGGTGATTTCCCGT
GAGCAACTGTGTCTCAGCACTTAAATCCTCTCTGTATTCACTGGAAAACCTCAGAGACAG
CATCTGCCATGAGCCTCCCCCTGGAGCAGCCTTAACCCACACTTCCAGCCAAAGTCCCTA
CCCTGTCACCTCACCCTGTGCTCTTTGAGTGTCTGGCGGGTACAGTATTCCTTTTCAGTA
TCCCCGAAGCTGTGACGGGGGAGTCCCCACTTACCTAGAAAGCATTACCAGGCGATTCTC
TGGCATTCTCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               357-672, gnl|bosTau2|chr19 (40728557-40728229)
               

               
               357-672, gnl|Hg17|chr17 (59471103-59470789)
               

               
               357-672, gnl|Mm7|chr11 (106504567-106504238)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               357-672, gnl|bosTau2|chr19 (40728557-40728229)
               

               
               357-672, gnl|Hg17|chr17 (59471103-59470789)
               

               
               357-672, gnl|Mm7|chr11 (106504567-106504238)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               bla (0.248694)
               

               
               ton (0.1755)
               

               
               cov (0.132153)
               

               
               clu (0.119646)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.248694)
               

               
               ton (0.1755)
               

               
               cov (0.132153)
               

               
               clu (0.119646)

	357-672, gnl\|bosTau2\|chr19 (40728557-40728229)
	357-672, gnl\|Hg17\|chr17 (59471103-59470789)
	357-672, gnl\|Mm7\|chr11 (106504567-106504238)