Non-Coding RNA Search

Ss1.1-rdbla0119_c2.5

Sequence:


               
               AGATAATTTACCACGCTAATGGTTAACATGTATGGGGGAAGTAGTACATTCACCCACTAA
GAAAGGGTTACTGTTGTTGGAGTTTCCTTATGGGTCAGGGGGTTAAGAACCTGATGTCAC
TGTGGCAAAGGTTGGATTCCTGACCCGGGAACTTCCACATGCCTCAGGCATGGCCAAACC
AAAAAACAACCCCCACAAGTGTGCATGTATTTAATTTTTCCTTCTTTGTGGTAACAATAC
ATTATAACCATGGTTTATATTTATGAATTGCCTGAATATTTTATTTCTGAATTAAAGATT
ATCACTGAAAAGACCTGTTAGTGTAACGGAATACTCTCAACCACAAGATGGCATTCCTAA
TGTAATTTGTCTTTGCTGATAACATTCTGCTTCATTTTCTGAGGAGAACTGCTTCCATAA
ACAAACATATTACAAATTGTCAAAAAAAAAAAAAAAAGAATTACAATAGTTAAATGAGCA
GAAATAATTTGTTTAAAAATTTAAAAAATTAAACCAATTATGTTAACTTTGGCTTCTAAA
AAGTACATTGAAAACCAAAAGTTGAAAACCAAGAGCAGTTACAAGAAAATAATGGAGGAT
TCAAAGTTCACTGGAGTTCCCATCATGGCTCAATGGTTAACGGATCCAACTAGGAACCAT
GAGATTGCGGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATAATTTACCACGCTAATGGTTAACATGTATGGGGGAAGTAGTACATTCACCCACTAA
GAAAGGGTTACTGTTGTTGGAGTTTCCTTATGGGTCAGGGGGTTAAGAACCTGATGTCAC
TGTGGCAAAGGTTGGATTCCTGACCCGGGAACTTCCACATGCCTCAGGCATGGCCAAACC
AAAAAACAACCCCCACAAGTGTGCATGTATTTAATTTTTCCTTCTTTGTGGTAACAATAC
ATTATAACCATGGTTTATATTTATGAATTGCCTGAATATTTTATTTCTGAATTAAAGATT
ATCACTGAAAAGACCTGTTAGTGTAACGGAATACTCTCAACCACAAGATGGCATTCCTAA
TGTAATTTGTCTTTGCTGATAACATTCTGCTTCATTTTCTGAGGAGAACTGCTTCCATAA
ACAAACATATTACAAATTGTCAAAAAAAAAAAAAAAAGAATTACAATAGTTAAATGAGCA
GAAATAATTTGTTTAAAAATTTAAAAAATTAAACCAATTATGTTAACTTTGGCTTCTAAA
AAGTACATTGAAAACCAAAAGTTGAAAACCAAGAGCAGTTACAAGAAAATAATGGAGGAT
TCAAAGTTCACTGGAGTTCCCATCATGGCTCAATGGTTAACGGATCCAACTAGGAACCAT
GAGATTGCGGGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               195-612, gnl|bosTau2|chr13 (14240920-14241339)
               

               
               195-612, gnl|Hg17|chr10 (25355485-25355897)
               

               
               195-612, gnl|Mm7|chr2 (21279546-21280107)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               195-612, gnl|bosTau2|chr13 (14240920-14241339)
               

               
               195-612, gnl|Hg17|chr10 (25355485-25355897)
               

               
               195-612, gnl|Mm7|chr2 (21279546-21280107)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               duo (0.345602)
               

               
               bla (0.248694)
               

               
               lnt (0.142308)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.345602)
               

               
               bla (0.248694)
               

               
               lnt (0.142308)

	195-612, gnl\|bosTau2\|chr13 (14240920-14241339)
	195-612, gnl\|Hg17\|chr10 (25355485-25355897)
	195-612, gnl\|Mm7\|chr2 (21279546-21280107)