Non-Coding RNA Search

Ss1.1-rdbla0120_i14.5

Sequence:


               
               GCTGTAAAAAATTTAAAAAACAAAAACAGCAAGCTGGGAAGACTTTTTTGTAGATATAAG
GCAACAGACAGAACAGATTTTACATATATCATGAAGAACCTGCAGTTCTTTCTACCTCTC
CTTATTCCTTATTCCGTCAACCTTTGTCCCCAGCCAGAGTCCTTCCTTATTATGGAAGCC
ATTCTAGAGGAAAAGAAAATGATTTCTTGGAAAAAATAACATTAGGCCTCTATTAAATTT
TTGGTTTAACTCCTGTTTTTACGTGACTGACAAAATACTAATATTTTTTAACAGAAGTAA
TGGTTCTTTTTAACATCTCTAATCTGATGTGGCACTGGAGCATTTTCAGAGCTGTCCCCC
TCTGTAGCGGGGCTAAAGAGGACCTTTCCTGTCTTCTCATCTCTCTCTCCTCTCTCTTGT
ATTAAAAGGGTAAACACTAATGGATTATAAGTTTTCTTAGGATACATTTCTATTTCCTTG
TAAGATCCTCTAAAACCAATTACTACTGGCAGTTTGGAGGTTTCAAATGGGTTTTATCAA
GGGTAGGCCTTGAGAAATTCTTAAATCTAGAATTCCACTGGAAAAAATAATTCATTGGCA
TCTCTCAGAACGTTGCAGGTGAAGAATCAATAGACTGGCATTGATTCTTTAGAGTGGGGC
AGGTGCCACAATATGATCCTTAGAGCATTTAATTCACATGGGGGACATTGCTTTGACTTG
AGATTGGGAGGATTCATTAAAGGAATCCAAAACTCTAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGTAAAAAATTTAAAAAACAAAAACAGCAAGCTGGGAAGACTTTTTTGTAGATATAAG
GCAACAGACAGAACAGATTTTACATATATCATGAAGAACCTGCAGTTCTTTCTACCTCTC
CTTATTCCTTATTCCGTCAACCTTTGTCCCCAGCCAGAGTCCTTCCTTATTATGGAAGCC
ATTCTAGAGGAAAAGAAAATGATTTCTTGGAAAAAATAACATTAGGCCTCTATTAAATTT
TTGGTTTAACTCCTGTTTTTACGTGACTGACAAAATACTAATATTTTTTAACAGAAGTAA
TGGTTCTTTTTAACATCTCTAATCTGATGTGGCACTGGAGCATTTTCAGAGCTGTCCCCC
TCTGTAGCGGGGCTAAAGAGGACCTTTCCTGTCTTCTCATCTCTCTCTCCTCTCTCTTGT
ATTAAAAGGGTAAACACTAATGGATTATAAGTTTTCTTAGGATACATTTCTATTTCCTTG
TAAGATCCTCTAAAACCAATTACTACTGGCAGTTTGGAGGTTTCAAATGGGTTTTATCAA
GGGTAGGCCTTGAGAAATTCTTAAATCTAGAATTCCACTGGAAAAAATAATTCATTGGCA
TCTCTCAGAACGTTGCAGGTGAAGAATCAATAGACTGGCATTGATTCTTTAGAGTGGGGC
AGGTGCCACAATATGATCCTTAGAGCATTTAATTCACATGGGGGACATTGCTTTGACTTG
AGATTGGGAGGATTCATTAAAGGAATCCAAAACTCTAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               23-539, gnl|bosTau2|chr1 (64935148-64935665)
               

               
               23-539, gnl|Hg17|chr3 (172800477-172799269)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-539, gnl|bosTau2|chr1 (64935148-64935665)
               

               
               23-539, gnl|Hg17|chr3 (172800477-172799269)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               bla (0.124347)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)
               

               
               jej (0.0989218)

	23-539, gnl\|bosTau2\|chr1 (64935148-64935665)
	23-539, gnl\|Hg17\|chr3 (172800477-172799269)