Ss1.1-rdbla0126_d7.5
|
TGAACTTGCCCAGGTCACAGAGCTGGTTAGAGAGCTAGAATTGAGCCTGGGCCATCTGGC
TCCAAGACCACGTTCTTAACACTGTGAACTTTCTTGCCTCTTGTAGCTCATAGGTTCGGG
GATAATTCTTGAAGACCACATGGAGTTTGTCATTCACCTGAAATTTAACAATTTAAAAGG
TCTTTTAGGAGTTCCCTGGTGGCCTAGCAGTTAAAGATCTGGTGTCATCACTGCTGTGGC
TCTAAGTCGATCCCTTCCCCAGGAATTTTCATATGCCATGAGTGCAGCCAAAAACAAAAC
AGGATAAAATAAAAATAAATAAATAGGAGCTCCTGCTGTGGTCCAAAGGGATCGGAGGCA
TCTCTGGAGCACTGGGACAGAGGCTCAGTGGTAGAGTGGGTTAAGGATCTGTGTTGCCGC
AGCTTAGATCTGATCCCTGGGAACTCCACATGTCACGAGGTGGCCAAAAAATAAAAATAA
ATCAATAAATAATGAAGTGTTTTTTTAGTAATGTGATTAAGACAGATACTGCTAACCCTG
CCTTTCTTTTCCCCTTTCTACCAAAATGGTATCTTTTAGCAAGTAGACAACTCACATTGA
AGAGACGTCCCATTTTGATGGATTGTTTTTCTTTTCAGAAAGACTTGGCTTTCTTGTCCT
TTCGACTATTTCTTCTTCAGGTGGTCCCAAGTCATC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGAACTTGCCCAGGTCACAGAGCTGGTTAGAGAGCTAGAATTGAGCCTGGGCCATCTGGC
TCCAAGACCACGTTCTTAACACTGTGAACTTTCTTGCCTCTTGTAGCTCATAGGTTCGGG
GATAATTCTTGAAGACCACATGGAGTTTGTCATTCACCTGAAATTTAACAATTTAAAAGG
TCTTTTAGGAGTTCCCTGGTGGCCTAGCAGTTAAAGATCTGGTGTCATCACTGCTGTGGC
TCTAAGTCGATCCCTTCCCCAGGAATTTTCATATGCCATGAGTGCAGCCAAAAACAAAAC
AGGATAAAATAAAAATAAATAAATAGGAGCTCCTGCTGTGGTCCAAAGGGATCGGAGGCA
TCTCTGGAGCACTGGGACAGAGGCTCAGTGGTAGAGTGGGTTAAGGATCTGTGTTGCCGC
AGCTTAGATCTGATCCCTGGGAACTCCACATGTCACGAGGTGGCCAAAAAATAAAAATAA
ATCAATAAATAATGAAGTGTTTTTTTAGTAATGTGATTAAGACAGATACTGCTAACCCTG
CCTTTCTTTTCCCCTTTCTACCAAAATGGTATCTTTTAGCAAGTAGACAACTCACATTGA
AGAGACGTCCCATTTTGATGGATTGTTTTTCTTTTCAGAAAGACTTGGCTTTCTTGTCCT
TTCGACTATTTCTTCTTCAGGTGGTCCCAAGTCATC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
50-188, gnl|bosTau2|chr5 (51803289-51803429) |
| |
|
528-696, gnl|bosTau2|chr5 (51803789-51803957) |
|
528-696, gnl|canFam2|chr27 (25386371-25386227) |
|
528-696, gnl|dasNov1|scaffold_16559 (9927-9782) |
|
528-696, gnl|echTel1|scaffold_323650 (4230-4085) |
|
528-696, gnl|galGal2|chr1 (63754703-63754833) |
|
528-696, gnl|hg17|chr12 (25151135-25151280) |
|
528-696, gnl|Hg17|chr12 (25151319-25151151) |
|
528-696, gnl|loxAfr1|scaffold_1796 (44316-44465) |
|
528-696, gnl|mm7|chr6 (145264557-145264690) |
|
528-696, gnl|Mm7|chr6 (145264716-145264573) |
|
528-696, gnl|monDom2|scaffold_31 (469355-469215) |
|
528-696, gnl|oryCun1|scaffold_210328 (9536-9397) |
|
528-696, gnl|panTro1|chrUn_random (51552209-51552354) |
|
528-696, gnl|rheMac2|chr11 (25384373-25384518) |
|
528-696, gnl|rn3|chr4 (183067039-183067165) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
50-188, gnl|bosTau2|chr5 (51803289-51803429) |
| |
|
528-696, gnl|bosTau2|chr5 (51803789-51803957) |
|
528-696, gnl|canFam2|chr27 (25386371-25386227) |
|
528-696, gnl|dasNov1|scaffold_16559 (9927-9782) |
|
528-696, gnl|echTel1|scaffold_323650 (4230-4085) |
|
528-696, gnl|galGal2|chr1 (63754703-63754833) |
|
528-696, gnl|hg17|chr12 (25151135-25151280) |
|
528-696, gnl|Hg17|chr12 (25151319-25151151) |
|
528-696, gnl|loxAfr1|scaffold_1796 (44316-44465) |
|
528-696, gnl|mm7|chr6 (145264557-145264690) |
|
528-696, gnl|Mm7|chr6 (145264716-145264573) |
|
528-696, gnl|monDom2|scaffold_31 (469355-469215) |
|
528-696, gnl|oryCun1|scaffold_210328 (9536-9397) |
|
528-696, gnl|panTro1|chrUn_random (51552209-51552354) |
|
528-696, gnl|rheMac2|chr11 (25384373-25384518) |
|
528-696, gnl|rn3|chr4 (183067039-183067165) |
|
cut (0.169924) |
|
bla (0.124347) |
|
cut (0.169924) |
|
bla (0.124347) |
