Non-Coding RNA Search

Ss1.1-rdbla0127_n11.5

Sequence:


               
               GAACTTTGCACATAATCAGTCATACAATCTTTTTGAAAATATTCTGCAAATATGTGTTTA
GACAATTAGATGGACTAGAGTTTGGCAAATGACTTCCCTTTTATTTAAATTTTTTATAAA
TATTTTCTTTGGTACTTTTAAGTCATATTGTGTTCTTGAATATTTTATTATACTGTATTT
GTCAGTGCATGTGTTTTTAATTCACATGAAAACATGAATTAGGGATGGAGACTTTTCAAA
TTGAATGTTAAAATATGTGTTATAGGCTTTGAAGAAATGATAACCCAGATTGTTGTGTGG
GGAAAACATCTGTATTGTTTTTAAGTTGTACTGTAATATGTAACCTATATGCAGAGTCCT
GGGCATCACCATAAAGAGCAGATCCAGGAGATGAAGAGATGATAAAGCTAGCTTAAGCAT
TTACATTTCCAGTCTACCCAGTCCAGTCATAGTACAAGCAAATCTTATATTTCAGGAACA
AAATCGATATTCCCTTAATCTCCTACTTATATTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACTTTGCACATAATCAGTCATACAATCTTTTTGAAAATATTCTGCAAATATGTGTTTA
GACAATTAGATGGACTAGAGTTTGGCAAATGACTTCCCTTTTATTTAAATTTTTTATAAA
TATTTTCTTTGGTACTTTTAAGTCATATTGTGTTCTTGAATATTTTATTATACTGTATTT
GTCAGTGCATGTGTTTTTAATTCACATGAAAACATGAATTAGGGATGGAGACTTTTCAAA
TTGAATGTTAAAATATGTGTTATAGGCTTTGAAGAAATGATAACCCAGATTGTTGTGTGG
GGAAAACATCTGTATTGTTTTTAAGTTGTACTGTAATATGTAACCTATATGCAGAGTCCT
GGGCATCACCATAAAGAGCAGATCCAGGAGATGAAGAGATGATAAAGCTAGCTTAAGCAT
TTACATTTCCAGTCTACCCAGTCCAGTCATAGTACAAGCAAATCTTATATTTCAGGAACA
AAATCGATATTCCCTTAATCTCCTACTTATATTCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-512, gnl|bosTau2|chr21 (20381165-20380653)
               

               
               1-512, gnl|Hg17|chr15 (76578949-76579748)
               

               
               1-512, gnl|Mm7|chr9 (54940423-54940882)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-512, gnl|bosTau2|chr21 (20381165-20380653)
               

               
               1-512, gnl|Hg17|chr15 (76578949-76579748)
               

               
               1-512, gnl|Mm7|chr9 (54940423-54940882)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               che (0.136314)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               bla (0.124347)

	1-512, gnl\|bosTau2\|chr21 (20381165-20380653)
	1-512, gnl\|Hg17\|chr15 (76578949-76579748)
	1-512, gnl\|Mm7\|chr9 (54940423-54940882)