Non-Coding RNA Search

Ss1.1-rdbla0128_p13.5

Sequence:


               
               TCGTGGACTACCTGGACCCACTGACAACCGTCAGGCCCAAGACAGATGAGGAGAAAAGGC
GACCTGATATTTTCCATGCATTGAAAATGGGAAACTTCCAGCTGGTCAAGGAGATTGCCG
ACGAAGACCCCAACCATGTGAATCTGGTCAATGGAGATGGTGCGACCCCCCTGATGTTGG
CAGCTGTCATGGGGCAGCTGCCTCTGGTGCAGCTACTGGTGGAGAGGCATGCTGACGTGG
ACAAGCAGGACAGCGTGCACGGCTGGACAGCACTCATGCAGGCCACCTACCACGGGAATA
AGGAGATTGTCAAATATCTGCTGAACCAAGGGGCTGATGTCACTCTTCGTGCAAAAAACG
GAGCGTGTGAGGGAAGCAGAGCCTCACGTCGTCTTGTGGACTGTGGTACCTGGCGCCTGG
CAAGCGACTTGATCCCTGCTGGAGAGGTGGGGCCCTCCACCCAAGTCAGTGATCTCACTC
CTCACGTATCTGGAGTTCACGTCCTTCGGAATCAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGTGGACTACCTGGACCCACTGACAACCGTCAGGCCCAAGACAGATGAGGAGAAAAGGC
GACCTGATATTTTCCATGCATTGAAAATGGGAAACTTCCAGCTGGTCAAGGAGATTGCCG
ACGAAGACCCCAACCATGTGAATCTGGTCAATGGAGATGGTGCGACCCCCCTGATGTTGG
CAGCTGTCATGGGGCAGCTGCCTCTGGTGCAGCTACTGGTGGAGAGGCATGCTGACGTGG
ACAAGCAGGACAGCGTGCACGGCTGGACAGCACTCATGCAGGCCACCTACCACGGGAATA
AGGAGATTGTCAAATATCTGCTGAACCAAGGGGCTGATGTCACTCTTCGTGCAAAAAACG
GAGCGTGTGAGGGAAGCAGAGCCTCACGTCGTCTTGTGGACTGTGGTACCTGGCGCCTGG
CAAGCGACTTGATCCCTGCTGGAGAGGTGGGGCCCTCCACCCAAGTCAGTGATCTCACTC
CTCACGTATCTGGAGTTCACGTCCTTCGGAATCAGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               90-296, + strand, RNAz p=0.747216

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               90-296, + strand, RNAz p=0.747216

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of BC064367, +

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of BC064367, +

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               90-296, gnl|bosTau2|chr8 (35165339-35165545)
               

               
               90-296, gnl|Hg17|chr9 (98625995-98625789)
               

               
               90-296, gnl|Mm7|chr4 (47058839-47058633)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               90-296, gnl|bosTau2|chr8 (35165339-35165545)
               

               
               90-296, gnl|Hg17|chr9 (98625995-98625789)
               

               
               90-296, gnl|Mm7|chr4 (47058839-47058633)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               bla (0.124347)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	90-296, gnl\|bosTau2\|chr8 (35165339-35165545)
	90-296, gnl\|Hg17\|chr9 (98625995-98625789)
	90-296, gnl\|Mm7\|chr4 (47058839-47058633)