Ss1.1-rdbla0133_n7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAACTTCTGGGAAAATGGAAGCCAATGGATGTAGAGGATTCCTTGGAGCTATTATCATC CCATTACACCAATCCAACAGTGAGACGTTATGCAGTTGCCCGATTACGGCAGGCAGATGA TGAGCTCCCAAATTATAACCAGCCCTCTTCCTCCAGTGTCTTCCCCTCCTCCTGCATCTA AAACAAAAGAAAGTTCAGATGGTGAAAGTCTGGAACAAGATCTGTGTACCTTCCTGATAT CAAGAGCCTGCAAAAACTCAACACTGGCTAATTATTTATACTGGTATGTGATAGTAGAAT GTGAAGATCAAGATACTCAGCAGAGAGATCCAAAGACCCATGAGATGTACTTGAATGTAA TGAGACGATTCAGCCAAGCATTGTTGAAGGGTGATAAATCTGTCAGAGTTATGCGTTCGT TGCTGGCTGCACAGCAGACATTTGTAGATCGACTGGTGCACCTAATGAAGGCAGTTCAAC GTGAAAGTGGGAATCGTAAGAAAAAGAATGAGAGACTACAGGCATTGCTTGGAGACAATG AAAAGATGAACTTGTCAGATGTGGAACTTATCCCATTGCCTTTAGAACCCCAGGTGAAAA TTAGAGGAATAATCCCAGAAACAGCTACATTATTCAAGAGTGCCCTTATGCCTGCACAGT TATTCTTTAAGACAGAAGATGGAGGCAAATACCCAGTTATATTTAAACATGGGGATGATT TACGCCAAGATCAACTTATTCTCCAAATCATTTCACTCATGGACAAGCTGTTGCGGAAAG AAAATCTGGATTTAAAGTTGACACCCTATAAAGTATTAGCCACTAGTACAAAACATGGCT TCATGCAGTTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAACTTCTGGGAAAATGGAAGCCAATGGATGTAGAGGATTCCTTGGAGCTATTATCATC CCATTACACCAATCCAACAGTGAGACGTTATGCAGTTGCCCGATTACGGCAGGCAGATGA TGAGCTCCCAAATTATAACCAGCCCTCTTCCTCCAGTGTCTTCCCCTCCTCCTGCATCTA AAACAAAAGAAAGTTCAGATGGTGAAAGTCTGGAACAAGATCTGTGTACCTTCCTGATAT CAAGAGCCTGCAAAAACTCAACACTGGCTAATTATTTATACTGGTATGTGATAGTAGAAT GTGAAGATCAAGATACTCAGCAGAGAGATCCAAAGACCCATGAGATGTACTTGAATGTAA TGAGACGATTCAGCCAAGCATTGTTGAAGGGTGATAAATCTGTCAGAGTTATGCGTTCGT TGCTGGCTGCACAGCAGACATTTGTAGATCGACTGGTGCACCTAATGAAGGCAGTTCAAC GTGAAAGTGGGAATCGTAAGAAAAAGAATGAGAGACTACAGGCATTGCTTGGAGACAATG AAAAGATGAACTTGTCAGATGTGGAACTTATCCCATTGCCTTTAGAACCCCAGGTGAAAA TTAGAGGAATAATCCCAGAAACAGCTACATTATTCAAGAGTGCCCTTATGCCTGCACAGT TATTCTTTAAGACAGAAGATGGAGGCAAATACCCAGTTATATTTAAACATGGGGATGATT TACGCCAAGATCAACTTATTCTCCAAATCATTTCACTCATGGACAAGCTGTTGCGGAAAG AAAATCTGGATTTAAAGTTGACACCCTATAAAGTATTAGCCACTAGTACAAAACATGGCT TCATGCAGTTTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-129, gnl|bosTau2|chr14 (13524095-13523967) | |
| 1-129, gnl|Hg17|chr18 (37838380-37838508) | |
| 1-129, gnl|Mm7|chr18 (30692640-30692768) | |
| 283-390, gnl|bosTau2|chr14 (13502000-13501893) | |
| 283-390, gnl|canFam2|chr7 (51699798-51699628) | |
| 283-390, gnl|danRer3|chr7 (11165248-11165391) | |
| 283-390, gnl|dasNov1|scaffold_53335 (9260-9092) | |
| 283-390, gnl|echTel1|scaffold_87713 (668-499) | |
| 283-390, gnl|fr1|chrUn (150544787-150544897) | |
| 283-390, gnl|galGal2|chr4_random (454774-454885) | |
| 283-390, gnl|hg17|chr18 (37861379-37861548) | |
| 283-390, gnl|Hg17|chr18 (37861404-37861511) | |
| 283-390, gnl|loxAfr1|scaffold_1649 (88950-89120) | |
| 283-390, gnl|mm7|chr18 (30705197-30705357) | |
| 283-390, gnl|Mm7|chr18 (30705224-30705331) | |
| 283-390, gnl|monDom2|scaffold_4 (2482520-2482403) | |
| 283-390, gnl|oryCun1|scaffold_213943 (61586-61752) | |
| 283-390, gnl|panTro1|chr17 (34116114-34116284) | |
| 283-390, gnl|rheMac2|chr18 (35003024-35003194) | |
| 283-390, gnl|rn3|chr18 (22566131-22566291) | |
| 283-390, gnl|tetNig1|chrUn_random (21592210-21592086) | |
| 637-770, gnl|bosTau2|chr14 (13493122-13492989) | |
| 637-770, gnl|canFam2|chr7 (51690069-51689866) | |
| 637-770, gnl|danRer3|chr7 (11167199-11167396) | |
| 637-770, gnl|echTel1|scaffold_185661 (3474-3305) | |
| 637-770, gnl|fr1|chrUn (150545402-150545586) | |
| 637-770, gnl|galGal2|chr4_random (459184-459404) | |
| 637-770, gnl|hg17|chr18 (37871626-37871831) | |
| 637-770, gnl|Hg17|chr18 (37871652-37871785) | |
| 637-770, gnl|loxAfr1|scaffold_170831 (625-430) | |
| 637-770, gnl|mm7|chr18 (30713480-30713680) | |
| 637-770, gnl|Mm7|chr18 (30713504-30713637) | |
| 637-770, gnl|monDom2|scaffold_4 (2476985-2476794) | |
| 637-770, gnl|oryCun1|scaffold_189440 (8666-8486) | |
| 637-770, gnl|panTro1|chr17 (34126373-34126578) | |
| 637-770, gnl|rheMac2|chr18 (35013560-35013765) | |
| 637-770, gnl|rn3|chr18 (22577097-22577283) | |
| 637-770, gnl|tetNig1|chrUn_random (21591606-21591433) | |
| 637-770, gnl|xenTro1|scaffold_5 (5646769-5646970) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-129, gnl|bosTau2|chr14 (13524095-13523967) | |
| 1-129, gnl|Hg17|chr18 (37838380-37838508) | |
| 1-129, gnl|Mm7|chr18 (30692640-30692768) | |
| 283-390, gnl|bosTau2|chr14 (13502000-13501893) | |
| 283-390, gnl|canFam2|chr7 (51699798-51699628) | |
| 283-390, gnl|danRer3|chr7 (11165248-11165391) | |
| 283-390, gnl|dasNov1|scaffold_53335 (9260-9092) | |
| 283-390, gnl|echTel1|scaffold_87713 (668-499) | |
| 283-390, gnl|fr1|chrUn (150544787-150544897) | |
| 283-390, gnl|galGal2|chr4_random (454774-454885) | |
| 283-390, gnl|hg17|chr18 (37861379-37861548) | |
| 283-390, gnl|Hg17|chr18 (37861404-37861511) | |
| 283-390, gnl|loxAfr1|scaffold_1649 (88950-89120) | |
| 283-390, gnl|mm7|chr18 (30705197-30705357) | |
| 283-390, gnl|Mm7|chr18 (30705224-30705331) | |
| 283-390, gnl|monDom2|scaffold_4 (2482520-2482403) | |
| 283-390, gnl|oryCun1|scaffold_213943 (61586-61752) | |
| 283-390, gnl|panTro1|chr17 (34116114-34116284) | |
| 283-390, gnl|rheMac2|chr18 (35003024-35003194) | |
| 283-390, gnl|rn3|chr18 (22566131-22566291) | |
| 283-390, gnl|tetNig1|chrUn_random (21592210-21592086) | |
| 637-770, gnl|bosTau2|chr14 (13493122-13492989) | |
| 637-770, gnl|canFam2|chr7 (51690069-51689866) | |
| 637-770, gnl|danRer3|chr7 (11167199-11167396) | |
| 637-770, gnl|echTel1|scaffold_185661 (3474-3305) | |
| 637-770, gnl|fr1|chrUn (150545402-150545586) | |
| 637-770, gnl|galGal2|chr4_random (459184-459404) | |
| 637-770, gnl|hg17|chr18 (37871626-37871831) | |
| 637-770, gnl|Hg17|chr18 (37871652-37871785) | |
| 637-770, gnl|loxAfr1|scaffold_170831 (625-430) | |
| 637-770, gnl|mm7|chr18 (30713480-30713680) | |
| 637-770, gnl|Mm7|chr18 (30713504-30713637) | |
| 637-770, gnl|monDom2|scaffold_4 (2476985-2476794) | |
| 637-770, gnl|oryCun1|scaffold_189440 (8666-8486) | |
| 637-770, gnl|panTro1|chr17 (34126373-34126578) | |
| 637-770, gnl|rheMac2|chr18 (35013560-35013765) | |
| 637-770, gnl|rn3|chr18 (22577097-22577283) | |
| 637-770, gnl|tetNig1|chrUn_random (21591606-21591433) | |
| 637-770, gnl|xenTro1|scaffold_5 (5646769-5646970) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| bla (0.248694) | |
| spl (0.143184) | |
| cty (0.10408) |