Ss1.1-rdbla0134_a9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTACAGATTTATCACATAGTAT------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------TGTTGGCATCCA AAGCTGTTGGGGTGGATGGTGCTGAAAAAAAGGAAGACTACAATGAAACGGCTCCAATGC TGGAGCAGGCGATTTCACCTAAACCTCAAAGTCAGAAAAAAAATGAAGCTGACATTAGCA GTTCTGCCAACACTCAGAAACCTGCACTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTC GCAGCAAGAAATGCAAACATGAATCTGGAGATTCTTCTGGGTGTATAAAACCCCCTAAAT CACCACTTTCCCCAGAATTAATACAAGTCGAGGATTTGACGCTTGTATCTCAGCTTTCTT CTTCAGTGATTAATAAAACTAGTCCTCCACAGCCTGTGAACCCCCCTAGACCTTTCAAGC ATAGCGAGCGGAGAAGACGGTCTCAGCGTTTAGCCACCTTGCCCATGCCTGATGACTCTG TAGAAAAGCCTTCTCCTCCCTCTCCAGCCGCTGATGGCAAAGTATTCTCCCTCAGTTCTC AAAATCAGCAAGAATCTTCAGTGCCAGAGGTGCCTGATGTTGCACATTTGTCACTCGAGA AGCTGGGACCCTATCTCCCTCTCGACCTAAGTCATGGTTCGGAAGTCACAGCACCGCTAG CCCCAGATCCCTGTTACCGTAATGAATGTCCCCGGGCAGAAAAGGAAGATACTCAGATGC TTACAAATCTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTACAGATTTATCACATAGTAT------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------TGTTGGCATCCA AAGCTGTTGGGGTGGATGGTGCTGAAAAAAAGGAAGACTACAATGAAACGGCTCCAATGC TGGAGCAGGCGATTTCACCTAAACCTCAAAGTCAGAAAAAAAATGAAGCTGACATTAGCA GTTCTGCCAACACTCAGAAACCTGCACTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTC GCAGCAAGAAATGCAAACATGAATCTGGAGATTCTTCTGGGTGTATAAAACCCCCTAAAT CACCACTTTCCCCAGAATTAATACAAGTCGAGGATTTGACGCTTGTATCTCAGCTTTCTT CTTCAGTGATTAATAAAACTAGTCCTCCACAGCCTGTGAACCCCCCTAGACCTTTCAAGC ATAGCGAGCGGAGAAGACGGTCTCAGCGTTTAGCCACCTTGCCCATGCCTGATGACTCTG TAGAAAAGCCTTCTCCTCCCTCTCCAGCCGCTGATGGCAAAGTATTCTCCCTCAGTTCTC AAAATCAGCAAGAATCTTCAGTGCCAGAGGTGCCTGATGTTGCACATTTGTCACTCGAGA AGCTGGGACCCTATCTCCCTCTCGACCTAAGTCATGGTTCGGAAGTCACAGCACCGCTAG CCCCAGATCCCTGTTACCGTAATGAATGTCCCCGGGCAGAAAAGGAAGATACTCAGATGC TTACAAATCTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 102-359, gnl|bosTau2|chr14 (4413773-4414030) | |
| 102-359, gnl|canFam2|chr13 (32335367-32335637) | |
| 102-359, gnl|dasNov1|scaffold_13703 (47617-47887) | |
| 102-359, gnl|echTel1|scaffold_309760 (27865-27595) | |
| 102-359, gnl|galGal2|chr2 (142074389-142074118) | |
| 102-359, gnl|hg17|chr8 (133896062-133896332) | |
| 102-359, gnl|Hg17|chr8 (133896061-133896318) | |
| 102-359, gnl|loxAfr1|scaffold_22783 (71940-72210) | |
| 102-359, gnl|mm7|chr15 (66696559-66696826) | |
| 102-359, gnl|Mm7|chr15 (66696558-66696812) | |
| 102-359, gnl|monDom2|scaffold_3 (17576404-17576134) | |
| 102-359, gnl|oryCun1|scaffold_176403 (16139-15869) | |
| 102-359, gnl|panTro1|chr7 (136839602-136839871) | |
| 102-359, gnl|rheMac2|chr8 (135375473-135375743) | |
| 102-359, gnl|rn3|chr7 (104012586-104012853) | |
| 102-359, gnl|xenTro1|scaffold_854 (442225-442498) | |
| 546-708, gnl|bosTau2|chr14 (4416585-4416738) | |
| 546-708, gnl|canFam2|chr13 (32338085-32338388) | |
| 546-708, gnl|dasNov1|scaffold_13703 (50243-50543) | |
| 546-708, gnl|echTel1|scaffold_309760 (25274-24991) | |
| 546-708, gnl|galGal2|chr2 (142071814-142071523) | |
| 546-708, gnl|hg17|chr8 (133898678-133898978) | |
| 546-708, gnl|Hg17|chr8 (133898765-133898927) | |
| 546-708, gnl|loxAfr1|scaffold_22209 (33148-33449) | |
| 546-708, gnl|mm7|chr15 (66699091-66699393) | |
| 546-708, gnl|Mm7|chr15 (66699177-66699342) | |
| 546-708, gnl|monDom2|scaffold_3 (17573429-17573135) | |
| 546-708, gnl|oryCun1|scaffold_176403 (13475-13181) | |
| 546-708, gnl|panTro1|chr7 (136842219-136842519) | |
| 546-708, gnl|rheMac2|chr8 (135378091-135378391) | |
| 546-708, gnl|rn3|chr7 (104015162-104015464) | |
| 546-708, gnl|xenTro1|scaffold_854 (446289-446565) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 102-359, gnl|bosTau2|chr14 (4413773-4414030) | |
| 102-359, gnl|canFam2|chr13 (32335367-32335637) | |
| 102-359, gnl|dasNov1|scaffold_13703 (47617-47887) | |
| 102-359, gnl|echTel1|scaffold_309760 (27865-27595) | |
| 102-359, gnl|galGal2|chr2 (142074389-142074118) | |
| 102-359, gnl|hg17|chr8 (133896062-133896332) | |
| 102-359, gnl|Hg17|chr8 (133896061-133896318) | |
| 102-359, gnl|loxAfr1|scaffold_22783 (71940-72210) | |
| 102-359, gnl|mm7|chr15 (66696559-66696826) | |
| 102-359, gnl|Mm7|chr15 (66696558-66696812) | |
| 102-359, gnl|monDom2|scaffold_3 (17576404-17576134) | |
| 102-359, gnl|oryCun1|scaffold_176403 (16139-15869) | |
| 102-359, gnl|panTro1|chr7 (136839602-136839871) | |
| 102-359, gnl|rheMac2|chr8 (135375473-135375743) | |
| 102-359, gnl|rn3|chr7 (104012586-104012853) | |
| 102-359, gnl|xenTro1|scaffold_854 (442225-442498) | |
| 546-708, gnl|bosTau2|chr14 (4416585-4416738) | |
| 546-708, gnl|canFam2|chr13 (32338085-32338388) | |
| 546-708, gnl|dasNov1|scaffold_13703 (50243-50543) | |
| 546-708, gnl|echTel1|scaffold_309760 (25274-24991) | |
| 546-708, gnl|galGal2|chr2 (142071814-142071523) | |
| 546-708, gnl|hg17|chr8 (133898678-133898978) | |
| 546-708, gnl|Hg17|chr8 (133898765-133898927) | |
| 546-708, gnl|loxAfr1|scaffold_22209 (33148-33449) | |
| 546-708, gnl|mm7|chr15 (66699091-66699393) | |
| 546-708, gnl|Mm7|chr15 (66699177-66699342) | |
| 546-708, gnl|monDom2|scaffold_3 (17573429-17573135) | |
| 546-708, gnl|oryCun1|scaffold_176403 (13475-13181) | |
| 546-708, gnl|panTro1|chr7 (136842219-136842519) | |
| 546-708, gnl|rheMac2|chr8 (135378091-135378391) | |
| 546-708, gnl|rn3|chr7 (104015162-104015464) | |
| 546-708, gnl|xenTro1|scaffold_854 (446289-446565) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mga (0.160205) | |
| bla (0.124347) | |
| tra (0.123092) |