Non-Coding RNA Search

Ss1.1-rdbla0134_o4.5

Sequence:


               
               GAGACCTGCTCCTTAGAGATCTTGGATGGTGTAGATGTGTCTCTGTCTCCAATGAAGCCT
CCGGCACCCAGACACGGGATCTGGAGGCGTAGTGAGCCAAGTAACGCCTGCTGCATTGTC
TCCTGAGAACAGGCACGTGTGGACTCAGCTGGCAAAGTGGTACCTTGGCCCATGGAAAGC
AGGGGAGAGTGACCCTTTCTATCTGGCTTGCCTCGCCCTATGACCAGGATTGAGACACCG
TTAAAATGTTGCCAACTCAATGACAGATGACGTATTGGTGCATTTGCAAGGCCGGGCCTT
CCCAGTTGTCTGTGTGAAGGACCTCATTGGTTTCGCGTGGCGGATGCCAAAGAACTTGGA
AGCCAGCATGTTTTCAGGGTCCCAGCCTAATTCATCGACCCCTCTGATCTTTCGCCTGAT
CTCTCACGCTTATCCTGCTTTCAGCAAGAAGCAAACACGCCTAAGTTGACGGTTGAGGGA
ACATACTGTCTTGCTCTAAGGCACAACCTCTGGGCTGGAGTAGAGAGGACTCTGGTGGGA
AGGTTTTGCTGCTAACGTATTTATGGAATGAATGTATTTCATTCAAATCTGTATTCCTCT
AGGAAGGATTAAAATAAAAACTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGACCTGCTCCTTAGAGATCTTGGATGGTGTAGATGTGTCTCTGTCTCCAATGAAGCCT
CCGGCACCCAGACACGGGATCTGGAGGCGTAGTGAGCCAAGTAACGCCTGCTGCATTGTC
TCCTGAGAACAGGCACGTGTGGACTCAGCTGGCAAAGTGGTACCTTGGCCCATGGAAAGC
AGGGGAGAGTGACCCTTTCTATCTGGCTTGCCTCGCCCTATGACCAGGATTGAGACACCG
TTAAAATGTTGCCAACTCAATGACAGATGACGTATTGGTGCATTTGCAAGGCCGGGCCTT
CCCAGTTGTCTGTGTGAAGGACCTCATTGGTTTCGCGTGGCGGATGCCAAAGAACTTGGA
AGCCAGCATGTTTTCAGGGTCCCAGCCTAATTCATCGACCCCTCTGATCTTTCGCCTGAT
CTCTCACGCTTATCCTGCTTTCAGCAAGAAGCAAACACGCCTAAGTTGACGGTTGAGGGA
ACATACTGTCTTGCTCTAAGGCACAACCTCTGGGCTGGAGTAGAGAGGACTCTGGTGGGA
AGGTTTTGCTGCTAACGTATTTATGGAATGAATGTATTTCATTCAAATCTGTATTCCTCT
AGGAAGGATTAAAATAAAAACTTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               371-600, gnl|bosTau2|chr21 (15006901-15007133)
               

               
               371-600, gnl|Hg17|chr12 (106629376-106629147)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               371-600, gnl|bosTau2|chr21 (15006901-15007133)
               

               
               371-600, gnl|Hg17|chr12 (106629376-106629147)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fcc (0.197785)
               

               
               che (0.136314)
               

               
               bla (0.124347)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               che (0.136314)
               

               
               bla (0.124347)

	371-600, gnl\|bosTau2\|chr21 (15006901-15007133)
	371-600, gnl\|Hg17\|chr12 (106629376-106629147)